RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SHISA3A0PJX4 238 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 MINDY4BA8MYZ0 360 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 FFAR3O14843 346 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 SLC25A27O95847 323 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 CD4P01730 458 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 AKR1A1P14550 325 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 CSF2RAP15509 400 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 PNLIPP16233 465 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 CYP2C18P33260 490 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 CCNFP41002 786 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 SLURP1P55000 103 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 FPGSQ05932 587 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 LAPTM5Q13571 262 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 MFSD5Q6N075 450 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 CTR9Q6PD62 1173 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 MAMDC4Q6UXC1 1216 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 ZNF365Q70YC5 407 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 RNF180Q86T96 592 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 ITPRIPQ8IWB1 547 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 SLC16A11Q8NCK7 471 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 TIFAQ96CG3 184 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 MAP6Q96JE9 813 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 DNAJC2Q99543 621 aaKnown RBP5.49□□□□□ -1.53
CKS1B-207ENST00000477676 PUS7LQ9H0K6 701 aaKnown RBP5.49□□□□□ -1.53
CKS1B-207ENST00000477676 UPF3AQ9H1J1 476 aaKnown RBP5.49□□□□□ -1.53
CKS1B-207ENST00000477676 GMIPQ9P107 970 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 DIS3Q9Y2L1 958 aaKnown RBP5.49□□□□□ -1.53
CKS1B-207ENST00000477676 SUPT16HQ9Y5B9 1047 aaKnown RBP5.49□□□□□ -1.53
CKS1B-207ENST00000477676 TAF6LQ9Y6J9 622 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 ZNF318Q5VUA4 2279 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 IGKV6D-41A0A0C4DH26 115 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.48□□□□□ -1.53
CKS1B-207ENST00000477676 A0A1W2PQ27 194 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 A0A1W2PQ64 194 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 A0A1W2PQC6 194 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 A0A1W2PQD8 194 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 ARVCFO00192 962 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 DUSP11O75319 330 aaKnown RBP5.48□□□□□ -1.53
CKS1B-207ENST00000477676 CLEC3AO75596 197 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 NDUFB10O96000 172 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 ASGR1P07306 291 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 MYOGP15173 224 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 CST5P28325 142 aaPredicted RBP5.48□□□□□ -1.53
CKS1B-207ENST00000477676 MFAP1P55081 439 aaKnown RBP5.48□□□□□ -1.53
CKS1B-207ENST00000477676 GJA9P57773 515 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 ERVFRD-1P60508 538 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 BEX3Q00994 111 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 CNTN2Q02246 1040 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 ACVR2BQ13705 512 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 LRRFIP1Q32MZ4 808 aaKnown RBP5.48□□□□□ -1.53
CKS1B-207ENST00000477676 CCDC144BQ3MJ40 725 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 UBXN11Q5T124 520 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 SNRNP48Q6IEG0 339 aaKnown RBP5.48□□□□□ -1.53
CKS1B-207ENST00000477676 TMED8Q6PL24 325 aaPredicted RBP5.48□□□□□ -1.53
CKS1B-207ENST00000477676 FAM126BQ8IXS8 530 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 SLC43A3Q8NBI5 491 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.48□□□□□ -1.53
CKS1B-207ENST00000477676 PPM1EQ8WY54 764 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 TCTN2Q96GX1 697 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 RHOVQ96L33 236 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 FOXP3Q9BZS1 431 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 NKX2-4Q9H2Z4 354 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 BOLA2Q9H3K6 86 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 STARD7Q9NQZ5 370 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 ATP8A2Q9NTI2 1148 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 PAG1Q9NWQ8 432 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 SLC5A4Q9NY91 659 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 KLHL14Q9P2G3 628 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 SIP14410 1827 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 ELP1O95163 1332 aa5.48□□□□□ -1.53
CKS1B-207ENST00000477676 BAZ2BQ9UIF8 2168 aaKnown RBP5.48□□□□□ -1.53
CKS1B-207ENST00000477676 DOCK5Q9H7D0 1870 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 MICAL3Q7RTP6 2002 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 EPOPA6NHQ4 379 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 GSG1L2A8MUP6 293 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 F5H6K3 240 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 CCER2I3L3R5 266 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 MATN3O15232 486 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 FSHBP01225 129 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 SYPP08247 313 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 C6orf222P0C671 652 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-207ENST00000477676 RABGGTBP53611 331 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 NKX3-2P78367 333 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 TFF2Q03403 129 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 FAM160A1Q05DH4 1040 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 KLRC3Q07444 240 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 KCTD2Q14681 263 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 TTF1Q15361 905 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-207ENST00000477676 ARSHQ5FYA8 562 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 AKNAD1Q5T1N1 836 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 KRT40Q6A162 431 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 ARMCX2Q7L311 632 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 RASGRP2Q7LDG7 609 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 FERMT3Q86UX7 667 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 CCDC144CPQ8IYA2 1237 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 FAM133AQ8N9E0 248 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 RGS22Q8NE09 1264 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 HERVK_113Q902F9 699 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 FCRL2Q96LA5 508 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms