RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MTF1Q14872 753 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 SPATA2LQ8IUW3 424 aaPredicted RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 SNF8Q96H20 258 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 E2F8A0AVK6 867 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 ASMTLO95671 621 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 ATP1A1P05023 1023 aaKnown RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 IRF1P10914 325 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 WDR72Q3MJ13 1102 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 SPDYAQ5MJ70 313 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 IZUMO3Q5VZ72 239 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 CATSPER3Q86XQ3 398 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 FAM161BQ96MY7 647 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 DACH2Q96NX9 599 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 LBHD1Q9BQE6 289 aaPredicted RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 MAP3K4Q9Y6R4 1608 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 GRAP2O75791 330 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 SULT1E1P49888 294 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 HNRNPH2P55795 449 aaKnown RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 CAV1Q03135 178 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 KRT17Q04695 432 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 PTCH1Q13635 1447 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 FLOT2Q14254 428 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 MAP3K20Q9NYL2 800 aaKnown RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 ZBTB12Q9Y330 459 aaPredicted RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 STAT5BP51692 787 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 VEPH1Q14D04 833 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 TEKT4Q8WW24 435 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 HECW2Q9P2P5 1572 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 PVALEFA0A1B0GWK0 134 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 SOX11P35716 441 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 CCDC144BQ3MJ40 725 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 TAF1DQ9H5J8 278 aaPredicted RBP11.59□□□□□ -0.55
VAPB-204ENST00000475243 ADAM21Q9UKJ8 722 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 RALAP11233 206 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 PPP2R2AP63151 447 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 LRRC8EQ6NSJ5 796 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 USP33Q8TEY7 942 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 GMNCA6NCL1 334 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 NAA30Q147X3 362 aaPredicted RBP11.59□□□□□ -0.55
VAPB-204ENST00000475243 AGAP1Q9UPQ3 857 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 ZCCHC11Q5TAX3 1644 aaKnown RBP11.59□□□□□ -0.55
VAPB-204ENST00000475243 RARBP10826 455 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 TPI1P60174 286 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 ECT2Q9H8V3 914 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 SPATS2LQ9NUQ6 558 aaKnown RBP11.59□□□□□ -0.55
VAPB-204ENST00000475243 PYGLP06737 847 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 MTM1Q13496 603 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 PCSK7Q16549 785 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 YAF2Q8IY57 180 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 DDX56Q9NY93 547 aaKnown RBP11.59□□□□□ -0.55
VAPB-204ENST00000475243 TLR2O60603 784 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 USP11P51784 963 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 NFIXQ14938 502 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 PPP1R18Q6NYC8 613 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 TRIM54Q9BYV2 358 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 BFARQ9NZS9 450 aa11.59□□□□□ -0.55
VAPB-204ENST00000475243 TNPO2O14787 897 aaKnown RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 GFAPP14136 432 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 CDK17Q00537 523 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 CLMNQ96JQ2 1002 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 CHP1Q99653 195 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 AGPAT1Q99943 283 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 ASPSCR1Q9BZE9 553 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 PRKCBP05771 671 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 KCNA2P16389 499 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 NAF1Q96HR8 494 aaKnown RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 EIF2AQ9BY44 585 aaKnown RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 UNC45AQ9H3U1 944 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 RUBCNLQ9H714 662 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 CNOT7Q9UIV1 285 aaKnown RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 SNX9Q9Y5X1 595 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 HIF1AQ16665 826 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 ZCCHC17Q9NP64 241 aaKnown RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 LMNAP02545 664 aaKnown RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 ARFIP2P53365 341 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 HPS4Q9NQG7 708 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 ZNF521Q96K83 1311 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 SARM1Q6SZW1 724 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 ZNF212Q9UDV6 495 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 ALDH18A1P54886 795 aaKnown RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 ATP2C1P98194 919 aaPredicted RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 BAATQ14032 418 aaPredicted RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 CEP55Q53EZ4 464 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 ITPRIPL1Q6GPH6 555 aa11.58□□□□□ -0.56
VAPB-204ENST00000475243 PRMT1Q99873 361 aaKnown RBP11.58□□□□□ -0.56
VAPB-204ENST00000475243 C16orf87Q6PH81 154 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 PGBD3Q8N328 593 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 C18orf8Q96DM3 657 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 DCUN1D1Q96GG9 259 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 AURKCQ9UQB9 309 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 SEC24DO94855 1032 aaPredicted RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 CHGBP05060 677 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 HSD17B4P51659 736 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 NLRP11P59045 1033 aaKnown RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 TRIM72Q6ZMU5 477 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 RRM2BQ7LG56 351 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 FAM118BQ9BPY3 351 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 STX18Q9P2W9 335 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms