RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ANKRD54Q6NXT1 300 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 TMEM184AQ6ZMB5 413 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 KCNK18Q7Z418 384 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 BRAPQ7Z569 592 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 COLGALT2Q8IYK4 626 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 CASP10Q92851 521 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 NT5C3AQ9H0P0 336 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 PDZD7Q9H5P4 517 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 PLA2G2EQ9NZK7 142 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 HCFC2Q9Y5Z7 792 aa10.39□□□□□ -0.75
PDPN-204ENST00000475043 C5orf42Q9H799 3197 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 PI4K2BG5E9Z4 385 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 C2CD2LO14523 706 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 INPPL1O15357 1258 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 ALADP13716 330 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 PDCP20941 246 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 DSC1Q08554 894 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 GRIK3Q13003 919 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 DMP1Q13316 513 aaPredicted RBP10.38□□□□□ -0.75
PDPN-204ENST00000475043 TPRNQ4KMQ1 711 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 RINT1Q6NUQ1 792 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 CABP7Q86V35 215 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 RASSF8Q8NHQ8 419 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 RPGRIP1Q96KN7 1286 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 DRC1Q96MC2 740 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 RUSC1Q9BVN2 902 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 VN1R3Q9BXE9 311 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 EMILIN2Q9BXX0 1053 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 CCDC113Q9H0I3 377 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 KMT5AQ9NQR1 393 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 MRPL17Q9NRX2 175 aaKnown RBP10.38□□□□□ -0.75
PDPN-204ENST00000475043 SNTG2Q9NY99 539 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 STK39Q9UEW8 545 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 GDAQ9Y2T3 454 aa10.38□□□□□ -0.75
PDPN-204ENST00000475043 PHLPP2Q6ZVD8 1323 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 FAM86C2PA6NEL3 165 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 SFI1A8K8P3 1242 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 F8W810 466 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 RECQL4O94761 1208 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 EDN1P05305 212 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 URODP06132 367 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 HOXB8P17481 243 aaPredicted RBP10.37□□□□□ -0.75
PDPN-204ENST00000475043 COL9A1P20849 921 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 KLRC2P26717 231 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 UBA7P41226 1012 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 NPTX2P47972 431 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 CBX2Q14781 532 aaPredicted RBP10.37□□□□□ -0.75
PDPN-204ENST00000475043 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
PDPN-204ENST00000475043 PTPN14Q15678 1187 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 TMEM31Q5JXX7 168 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 ATF7IP2Q5U623 682 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 EEF1DP3Q658K8 133 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 KIAA1841Q6NSI8 718 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 CES5AQ6NT32 575 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 SYCE2Q6PIF2 218 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 C1orf186Q6ZWK4 172 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 APBB1IPQ7Z5R6 666 aaPredicted RBP10.37□□□□□ -0.75
PDPN-204ENST00000475043 GSTCDQ8NEC7 633 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 RABGGTAQ92696 567 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 CALML4Q96GE6 196 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 AK8Q96MA6 479 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 PNMA5Q96PV4 448 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 COLEC11Q9BWP8 271 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 PHF7Q9BWX1 381 aaPredicted RBP10.37□□□□□ -0.75
PDPN-204ENST00000475043 MARCH5Q9NX47 278 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 IRAK3Q9Y616 596 aa10.37□□□□□ -0.75
PDPN-204ENST00000475043 SLC16A4O15374 487 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 DCXO43602 365 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 TADA2AO75478 443 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 BMP15O95972 392 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 SOD2P04179 222 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 THP07101 528 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 CNPP09543 421 aaKnown RBP10.36□□□□□ -0.75
PDPN-204ENST00000475043 WEE2P0C1S8 567 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 PLA2G4BP0C869 781 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 EPCAMP16422 314 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 SP100P23497 879 aaPredicted RBP10.36□□□□□ -0.75
PDPN-204ENST00000475043 GLUD2P49448 558 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 DHX8Q14562 1220 aaKnown RBP10.36□□□□□ -0.75
PDPN-204ENST00000475043 DCAF4L1Q3SXM0 396 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 HYIQ5T013 277 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 RARS2Q5T160 578 aaKnown RBP10.36□□□□□ -0.75
PDPN-204ENST00000475043 NT5DC1Q5TFE4 455 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 TAS1R1Q7RTX1 841 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 PPFIBP1Q86W92 1011 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 RNF135Q8IUD6 432 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 DAW1Q8N136 415 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 C12orf76Q8N812 135 aaPredicted RBP10.36□□□□□ -0.75
PDPN-204ENST00000475043 SYT2Q8N9I0 419 aaPredicted RBP10.36□□□□□ -0.75
PDPN-204ENST00000475043 SUSD6Q92537 303 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 EPAS1Q99814 870 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 TCHPQ9BT92 498 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 LRFN3Q9BTN0 628 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 TIPINQ9BVW5 301 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 S1PR5Q9H228 398 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 C17orf75Q9HAS0 396 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 CACNG4Q9UBN1 327 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 MUTYHQ9UIF7 546 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 CDH22Q9UJ99 828 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms