RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 CHRNB2P17787 502 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 TNFAIP3P21580 790 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 CTNNA1P35221 906 aaKnown RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 MXI1P50539 228 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 SMTNP53814 917 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 KRT76Q01546 638 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 MTMR3Q13615 1198 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 TMEM130Q8N3G9 435 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 KCTD17Q8N5Z5 321 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 CYFIP2Q96F07 1278 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 FAM213AQ9BRX8 229 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 HAPLN2Q9GZV7 340 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 PTPRJQ12913 1337 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 PGRMC1O00264 195 aaKnown RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 USP2O75604 605 aaPredicted RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 DMP1Q13316 513 aaPredicted RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 PRPF4BQ13523 1007 aaKnown RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 NSUN6Q8TEA1 469 aaKnown RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 POMGNT1Q8WZA1 660 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 ALG3Q92685 438 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 CLMNQ96JQ2 1002 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 TMEM206Q9H813 350 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 AMACRQ9UHK6 382 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 SLC12A6Q9UHW9 1150 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 AFG3L2Q9Y4W6 797 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 ARID2Q68CP9 1835 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 SART1O43290 800 aaKnown RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 JAK3P52333 1124 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 UAP1Q16222 522 aaPredicted RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 DAB2IPQ5VWQ8 1189 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 SPOPLQ6IQ16 392 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 KRT35Q92764 455 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 TEX13BQ9BXU2 312 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 ACTR5Q9H9F9 607 aaPredicted RBP13.39□□□□□ -0.27
RNF220-211ENST00000474956 ERVK-5Q9HDB9 667 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 ADAMTS5Q9UNA0 930 aa13.39□□□□□ -0.27
RNF220-211ENST00000474956 HNRNPDLO14979 420 aaKnown RBP13.38□□□□□ -0.27
RNF220-211ENST00000474956 FTLP02792 175 aaPredicted RBP13.38□□□□□ -0.27
RNF220-211ENST00000474956 MAPTP10636 758 aaKnown RBP13.38□□□□□ -0.27
RNF220-211ENST00000474956 FLT3P36888 993 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 ACOT2P49753 483 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 ZNF844Q08AG5 666 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 AGBL2Q5U5Z8 902 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 CCDC121Q6ZUS5 278 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 CCDC13Q8IYE1 715 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.276e-8■□□□□ 8.6
RNF220-211ENST00000474956 POLR3FQ9H1D9 316 aaPredicted RBP13.38□□□□□ -0.27
RNF220-211ENST00000474956 SLC9A2Q9UBY0 812 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 SNCAIPQ9Y6H5 919 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 MAP2K2P36507 400 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 VPS36Q86VN1 386 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 PARD3BQ8TEW8 1205 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 ZNF516Q92618 1163 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 TRIM31Q9BZY9 425 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 LRRC4CQ9HCJ2 640 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 PAPPA2Q9BXP8 1791 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 CHUKO15111 745 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 TRAPPC3O43617 180 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 KIF22Q14807 665 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 SLFN11Q7Z7L1 901 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 MAP4K3Q8IVH8 894 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 LMBR1Q8WVP7 490 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 ACAD9Q9H845 621 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 CYP26B1Q9NR63 512 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 KLC4Q9NSK0 619 aa13.38□□□□□ -0.27
RNF220-211ENST00000474956 ATP8B3O60423 1300 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 HARSP12081 509 aaKnown RBP13.37□□□□□ -0.27
RNF220-211ENST00000474956 ODF2Q5BJF6 829 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 ABHD15Q6UXT9 468 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 ARMC9Q7Z3E5 817 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 RPAINQ86UA6 219 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 TRIM50Q86XT4 487 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 OR2W6PQ8NHA6 318 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 ASAP3Q8TDY4 903 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 EPS8L1Q8TE68 723 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 BICD1Q96G01 975 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 TRIM7Q9C029 511 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 AS3MTQ9HBK9 375 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 GOLGA6L7A0A1B0GV03 622 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 DDX3YO15523 660 aaKnown RBP13.37□□□□□ -0.27
RNF220-211ENST00000474956 RASSF9O75901 435 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 FGGP02679 453 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 PGK2P07205 417 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 CFHP08603 1231 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 ANXA13P27216 316 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 SFNP31947 248 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 PPP2R2AP63151 447 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 PPATQ06203 517 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 SV2AQ7L0J3 742 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 ANKRD35Q8N283 1001 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 GPATCH11Q8N954 259 aa13.37□□□□□ -0.27
RNF220-211ENST00000474956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.37□□□□□ -0.277e-8■□□□□ 9.8
RNF220-211ENST00000474956 UBLCP1Q8WVY7 318 aaPredicted RBP13.37□□□□□ -0.27
RNF220-211ENST00000474956 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
RNF220-211ENST00000474956 GPRASP2Q96D09 838 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms