RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 GFPT2O94808 682 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 LCA5LO95447 670 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 C6orf222P0C671 652 aaPredicted RBP21.43■■□□□ 1.02
SSR1-204ENST00000474597 VAV2P52735 878 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 FAM187BQ17R55 369 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 ASTE1Q2TB18 679 aaPredicted RBP21.43■■□□□ 1.02
SSR1-204ENST00000474597 ZBTB41Q5SVQ8 909 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 CCDC122Q5T0U0 273 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 IRF2BP2Q7Z5L9 587 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 TRPV1Q8NER1 839 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 TSGA10Q9BZW7 698 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 MINDY3Q9H8M7 445 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 SPC25Q9HBM1 224 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 RAB20Q9NX57 234 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 GUCA1BQ9UMX6 200 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 COQ4Q9Y3A0 265 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 PCDHA13Q9Y5I0 950 aa21.43■■□□□ 1.02
SSR1-204ENST00000474597 B4GALT5O43286 388 aa21.42■■□□□ 1.02
SSR1-204ENST00000474597 GFPT1Q06210 699 aaPredicted RBP21.42■■□□□ 1.02
SSR1-204ENST00000474597 KIF5AQ12840 1032 aa21.42■■□□□ 1.02
SSR1-204ENST00000474597 SEZ6Q53EL9 994 aa21.42■■□□□ 1.02
SSR1-204ENST00000474597 ZNF662Q6ZS27 426 aa21.42■■□□□ 1.02
SSR1-204ENST00000474597 ZNF410Q86VK4 478 aa21.42■■□□□ 1.02
SSR1-204ENST00000474597 VPS36Q86VN1 386 aa21.42■■□□□ 1.02
SSR1-204ENST00000474597 KIAA0319LQ8IZA0 1049 aa21.42■■□□□ 1.02
SSR1-204ENST00000474597 TNFSF13BQ9Y275 285 aa21.42■■□□□ 1.02
SSR1-204ENST00000474597 PRKCIP41743 596 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 ARHGAP25P42331 645 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 GPC3P51654 580 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 CLDN10P78369 228 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 CDC42EP1Q00587 391 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 ARHGEF19Q8IW93 802 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 BRSK2Q8IWQ3 736 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 TAS1R2Q8TE23 839 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 NT5C1BQ96P26 610 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 CGRRF1Q99675 332 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 FAM49AQ9H0Q0 323 aaPredicted RBP21.41■■□□□ 1.02
SSR1-204ENST00000474597 MYO1AQ9UBC5 1043 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 HAS3O00219 553 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 ZNF263O14978 683 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 KPNA6O60684 536 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 TRPA1O75762 1119 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 CYP2C9P11712 490 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 PROZP22891 400 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 MAGEA1P43355 309 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 TERF1P54274 439 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 PTK2Q05397 1052 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 BIRC3Q13489 604 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 SLC18A3Q16572 532 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 ZNF569Q5MCW4 686 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 LMBRD2Q68DH5 695 aaPredicted RBP21.41■■□□□ 1.02
SSR1-204ENST00000474597 SRGAP1Q7Z6B7 1085 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 PPM1KQ8N3J5 372 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 SEMA4DQ92854 862 aa21.41■■□□□ 1.02
SSR1-204ENST00000474597 IRX2Q9BZI1 471 aaPredicted RBP21.41■■□□□ 1.02
SSR1-204ENST00000474597 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.41■■□□□ 1.022e-6■■□□□ 12.4
SSR1-204ENST00000474597 SMIM35A0A1B0GVV1 85 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 EVI5O60447 810 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 CSDE1O75534 798 aaKnown RBP21.4■■□□□ 1.02
SSR1-204ENST00000474597 ERLIN2O94905 339 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 PNMA6AP0CW24 399 aaPredicted RBP21.4■■□□□ 1.02
SSR1-204ENST00000474597 HOXD10P28358 340 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 TNFSF9P41273 254 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 MFAP3P55082 362 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 SURF1Q15526 300 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 GNASQ5JWF2 1037 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 ZNF516Q92618 1163 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 FAM212AQ96EL1 285 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 WDR24Q96S15 920 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 CNTNAP2Q9UHC6 1331 aa21.4■■□□□ 1.02
SSR1-204ENST00000474597 RBAK-RBAKDNI3L0D1 243 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 ABLIM1O14639 778 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 RIOK3O14730 519 aaKnown RBP21.39■■□□□ 1.02
SSR1-204ENST00000474597 LRRN2O75325 713 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 IQCF3P0C7M6 154 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 RARBP10826 455 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 GNAT1P11488 350 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 ANXA13P27216 316 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 PIK3CAP42336 1068 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 GJA9P57773 515 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 PURAQ00577 322 aaKnown RBP21.39■■□□□ 1.02
SSR1-204ENST00000474597 WDR44Q5JSH3 913 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 ZNF571Q7Z3V5 609 aaPredicted RBP21.39■■□□□ 1.02
SSR1-204ENST00000474597 THNSL1Q8IYQ7 743 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 PPP1R13LQ8WUF5 828 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 CFHR5Q9BXR6 569 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 PTPRHQ9HD43 1115 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 ADAMTS1Q9UHI8 967 aa21.39■■□□□ 1.02
SSR1-204ENST00000474597 C17orf102A2RUQ5 167 aa21.39■■□□□ 1.01
SSR1-204ENST00000474597 MBLAC1A4D2B0 266 aaPredicted RBP21.39■■□□□ 1.01
SSR1-204ENST00000474597 SEPT4O43236 478 aa21.39■■□□□ 1.01
SSR1-204ENST00000474597 ZC3H11AO75152 810 aaKnown RBP eCLIP21.39■■□□□ 1.01
SSR1-204ENST00000474597 AP3M2P53677 418 aa21.39■■□□□ 1.01
SSR1-204ENST00000474597 WNT7BP56706 349 aa21.39■■□□□ 1.01
SSR1-204ENST00000474597 ZACNQ401N2 412 aa21.39■■□□□ 1.01
SSR1-204ENST00000474597 EEF1DP3Q658K8 133 aa21.39■■□□□ 1.01
SSR1-204ENST00000474597 C15orf39Q6ZRI6 1047 aa21.39■■□□□ 1.01
SSR1-204ENST00000474597 C7orf31Q8N865 590 aa21.39■■□□□ 1.01
SSR1-204ENST00000474597 GCOM2Q9BZD3 368 aaPredicted RBP21.39■■□□□ 1.01
SSR1-204ENST00000474597 GPR88Q9GZN0 384 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms