RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 AMHR2Q16671 573 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 FAM228AQ86W67 206 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 NT5DC4Q86YG4 428 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 CCDC127Q96BQ5 260 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 IQCDQ96DY2 449 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 ZBTB45Q96K62 511 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-206ENST00000474564 FBXL18Q96ME1 805 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 CDT1Q9H211 546 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 NDST4Q9H3R1 872 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 ASB7Q9H672 318 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 PTPRHQ9HD43 1115 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 TAB2Q9NYJ8 693 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 IFNKQ9P0W0 207 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 PARP2Q9UGN5 583 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 EVPLQ92817 2033 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 NRDCO43847 1150 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 EVI5O60447 810 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 EFCAB14O75071 495 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 CLSTN1O94985 981 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 TIMP1P01033 207 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 TNNC2P02585 160 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 STAG3L1P0CL83 205 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 DLATP10515 647 aaKnown RBP11.23□□□□□ -0.61
COL12A1-206ENST00000474564 ITGA4P13612 1032 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 HOXA11P31270 313 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-206ENST00000474564 CASP4P49662 377 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 OSTNP61366 133 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 CYP24A1Q07973 514 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 IKBKEQ14164 716 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 PSMD6Q15008 389 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 LRRC26Q2I0M4 334 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
COL12A1-206ENST00000474564 SLC39A4Q6P5W5 647 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-206ENST00000474564 TRIM59Q8IWR1 403 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 SPC24Q8NBT2 197 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 TMEM40Q8WWA1 233 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 WNT8BQ93098 351 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 ABHD8Q96I13 439 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 ANKRD36BP1Q96IX9 119 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 MFSD14AQ96MC6 490 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 MED15Q96RN5 788 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 RPS6KC1Q96S38 1066 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 ADAM2Q99965 735 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 LBHD1Q9BQE6 289 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-206ENST00000474564 NUP58Q9BVL2 599 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 IMPG2Q9BZV3 1241 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 ERVK-5Q9HDB9 667 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 FAM105AQ9NUU6 356 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
COL12A1-206ENST00000474564 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL12A1-206ENST00000474564 LGALS16A8MUM7 142 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 TISP43B9A030 160 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 P4HA2O15460 535 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 HOXA2O43364 376 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 EOMESO95936 686 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 TMEM191BP0C7N4 346 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 ATP1A3P13637 1013 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 CYP2C18P33260 490 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 ZNF75DP51815 510 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 CCL23P55773 120 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 KCNH2Q12809 1159 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 DUOXA2Q1HG44 320 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 EEF1DP3Q658K8 133 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 KRT39Q6A163 491 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 GBP6Q6ZN66 633 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 PPFIBP1Q86W92 1011 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 CDR2LQ86X02 465 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-206ENST00000474564 CBWD2Q8IUF1 395 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 WDR49Q8IV35 697 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 BRSK2Q8IWQ3 736 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 TNS4Q8IZW8 715 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 ZNF397Q8NF99 534 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-206ENST00000474564 RSPH1Q8WYR4 309 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 DPF3Q92784 378 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 MRFAP1L1Q96HT8 127 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 PPP1R9BQ96SB3 815 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 TRAIPQ9BWF2 469 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 APOL6Q9BWW8 343 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 SLC38A7Q9NVC3 462 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 CPSF3Q9UKF6 684 aaKnown RBP11.22□□□□□ -0.61
COL12A1-206ENST00000474564 TBX21Q9UL17 535 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 USP20Q9Y2K6 914 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 DERAQ9Y315 318 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 PCDHB7Q9Y5E2 793 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 PCDHB2Q9Y5E7 798 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 NR2E3Q9Y5X4 410 aa11.22□□□□□ -0.61
COL12A1-206ENST00000474564 A0A0U1RQF3 1178 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 A0A1B0GTH6 734 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 GTPBP10A4D1E9 387 aaKnown RBP11.21□□□□□ -0.61
COL12A1-206ENST00000474564 ZNF623O75123 536 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 TFAMQ00059 246 aaKnown RBP11.21□□□□□ -0.61
COL12A1-206ENST00000474564 MYL7Q01449 175 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 PPIGQ13427 754 aaKnown RBP eCLIP11.21□□□□□ -0.61
COL12A1-206ENST00000474564 BIRC3Q13489 604 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 TRPC3Q13507 836 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms