RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 A6NHS1 94 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 IGF2BP3O00425 579 aaKnown RBP eCLIP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 DDX3YO15523 660 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 CYTH3O43739 400 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 SNHG28P0DPA3 235 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 MYBL1P10243 752 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 MAPTP10636 758 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 CYP11B2P19099 503 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 VCAM1P19320 739 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 PAX7P23759 505 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 PCK1P35558 622 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 GYG1P46976 350 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 CLK2P49760 499 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 DNA2P51530 1060 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 ALDH5A1P51649 535 aaPredicted RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 POLGP54098 1239 aaPredicted RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 RPS8P62241 208 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 ARID5AQ03989 594 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 PRPF4BQ13523 1007 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 AUHQ13825 339 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 ZC3H12AQ5D1E8 599 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 NUGGCQ68CJ6 796 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 CCDC137Q6PK04 289 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 VSIG1Q86XK7 387 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 TDRPQ86YL5 185 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 CCDC105Q8IYK2 499 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 CCDC89Q8N998 374 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 PIGOQ8TEQ8 1089 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 AGAP11Q8TF27 550 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 STK32AQ8WU08 396 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 DHX38Q92620 1227 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 KIFAP3Q92845 792 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 ALKBH8Q96BT7 664 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 STAMBPL1Q96FJ0 436 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 FAM163AQ96GL9 167 aaPredicted RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 CFAP57Q96MR6 1250 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 NLRP3Q96P20 1036 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 LRRC37BQ96QE4 947 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 LRFN3Q9BTN0 628 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 POLR3CQ9BUI4 534 aaPredicted RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 DPH5Q9H2P9 285 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 VCX3BQ9H321 246 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 VCX3AQ9NNX9 186 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 CYP39A1Q9NYL5 469 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 PDP2Q9P2J9 529 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 APEX2Q9UBZ4 518 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 PRKAG3Q9UGI9 489 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 SRP68Q9UHB9 627 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 SCOCQ9UIL1 159 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 SYNPO2Q9UMS6 1093 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 LRCH1Q9Y2L9 728 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 RABGAP1Q9Y3P9 1069 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 PCDHB13Q9Y5F0 798 aa8.58□□□□□ -1.04
CCDC93-208ENST00000474546 MYH14Q7Z406 1995 aaKnown RBP8.58□□□□□ -1.04
CCDC93-208ENST00000474546 CYP2D7A0A087X1C5 515 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TLDC2A0PJX2 215 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TMEM120BA0PK00 339 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 FAM47DPA6NHR8 397 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 A8MXQ7 604 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 DDX3XO00571 662 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 PRPF4O43172 522 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 SORBS3O60504 671 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 DIAPH2O60879 1101 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 UBOX5O94941 541 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TTC4O95801 387 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 SERPINB2P05120 415 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 RPSAP08865 295 aaKnown RBP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TROVE2P10155 538 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TSHRP16473 764 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 COILP38432 576 aaPredicted RBP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TM4SF4P48230 202 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TNNI2P48788 182 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 PAPOLAP51003 745 aaKnown RBP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 IRX4P78413 519 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 PTP4A2Q12974 167 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 PTK6Q13882 451 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 SPARCL1Q14515 664 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 Q4G0T1 1027 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 FAM133BQ5BKY9 247 aaKnown RBP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 C6orf163Q5TEZ5 329 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TCERG1LQ5VWI1 586 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TBC1D9BQ66K14 1250 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 PHLDB3Q6NSJ2 640 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 MIGA2Q7L4E1 593 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 ENOSF1Q7L5Y1 443 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 FAM186BQ8IYM0 893 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TDHQ8IZJ6 230 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 GALNT15Q8N3T1 639 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 RBBP8NLQ8NC74 664 aaPredicted RBP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 OR2W6PQ8NHA6 318 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 FBXO25Q8TCJ0 367 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 C7orf43Q8WVR3 580 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 APBB2Q92870 758 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 SLC35C1Q96A29 364 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 CCDC17Q96LX7 622 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 NR1H4Q96RI1 486 aaPredicted RBP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TGS1Q96RS0 853 aaKnown RBP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 GDF15Q99988 308 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TIPINQ9BVW5 301 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 OSBPL1AQ9BXW6 950 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms