RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TMX3Q96JJ7 454 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 SNTG2Q9NY99 539 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 SORCS3Q9UPU3 1222 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 SF3B1O75533 1304 aaKnown RBP eCLIP22.43■■□□□ 1.181e-7■■■■■ 172.3
PDLIM4-206ENST00000474421 THP07101 528 aa22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 HSP90AA2PQ14568 343 aaPredicted RBP22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 KANK3Q6NY19 840 aa22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 CCDC149Q6ZUS6 474 aa22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 FBXL6Q8N531 539 aa22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 KREMEN2Q8NCW0 462 aa22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 HDAC7Q8WUI4 952 aa22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 PRRX2Q99811 253 aa22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 MAN1C1Q9NR34 630 aa22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 DENND4AQ7Z401 1863 aa22.43■■□□□ 1.18
PDLIM4-206ENST00000474421 MTCL1Q9Y4B5 1905 aaKnown RBP22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 TTLL13PA6NNM8 815 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 F8W810 466 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 H3BQV1 296 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 K7ERI5 159 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 RECQL4O94761 1208 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 HOXD11P31277 338 aaPredicted RBP22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 ATF7IP2Q5U623 682 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 OTOP3Q7RTS5 596 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 KCTD17Q8N5Z5 321 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 DRC1Q96MC2 740 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 KIFC3Q9BVG8 833 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 RHOBTB2Q9BYZ6 727 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 GPR62Q9BZJ7 368 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 FNIP2Q9P278 1114 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 ZDBF2Q9HCK1 2354 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 WDFY4Q6ZS81 3184 aa22.42■■□□□ 1.18
PDLIM4-206ENST00000474421 PLXNA3P51805 1871 aa22.41■■□□□ 1.18
PDLIM4-206ENST00000474421 DMP1Q13316 513 aaPredicted RBP22.41■■□□□ 1.18
PDLIM4-206ENST00000474421 ASIC4Q96FT7 647 aa22.41■■□□□ 1.18
PDLIM4-206ENST00000474421 TIPINQ9BVW5 301 aa22.41■■□□□ 1.18
PDLIM4-206ENST00000474421 PLEKHA4Q9H4M7 779 aa22.41■■□□□ 1.18
PDLIM4-206ENST00000474421 C17orf75Q9HAS0 396 aa22.41■■□□□ 1.18
PDLIM4-206ENST00000474421 KCNG1Q9UIX4 513 aa22.41■■□□□ 1.18
PDLIM4-206ENST00000474421 C2orf16Q68DN1 1984 aa22.41■■□□□ 1.18
PDLIM4-206ENST00000474421 CCDC169A6NNP5 214 aa22.4■■□□□ 1.18
PDLIM4-206ENST00000474421 E9PMD0 336 aa22.4■■□□□ 1.18
PDLIM4-206ENST00000474421 PTGESO14684 152 aa22.4■■□□□ 1.18
PDLIM4-206ENST00000474421 GJB2P29033 226 aa22.4■■□□□ 1.18
PDLIM4-206ENST00000474421 ATP2C1P98194 919 aaPredicted RBP22.4■■□□□ 1.18
PDLIM4-206ENST00000474421 ELAVL2Q12926 359 aaKnown RBP22.4■■□□□ 1.18
PDLIM4-206ENST00000474421 RIN2Q8WYP3 895 aaPredicted RBP22.4■■□□□ 1.18
PDLIM4-206ENST00000474421 RBM19Q9Y4C8 960 aaKnown RBP22.4■■□□□ 1.18
PDLIM4-206ENST00000474421 PIEZO1Q92508 2521 aa22.39■■□□□ 1.18
PDLIM4-206ENST00000474421 CASTOR2A6NHX0 329 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 PP2D1A8MPX8 630 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 HIP1RO75146 1068 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 NPTX2P47972 431 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 PEX3P56589 373 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 IL17AQ16552 155 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 NT5DC1Q5TFE4 455 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 EEF1DP3Q658K8 133 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 STAMQ92783 540 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 NT5C3AQ9H0P0 336 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 TMEM134Q9H6X4 195 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 POLD4Q9HCU8 107 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 LIMD1Q9UGP4 676 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 TNFSF13BQ9Y275 285 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 GDAQ9Y2T3 454 aa22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.39■■□□□ 1.17
PDLIM4-206ENST00000474421 CCDC195A0A1B0GUA6 201 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 EDN1P05305 212 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 ARL6IP4Q66PJ3 421 aaKnown RBP22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 RINT1Q6NUQ1 792 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 PDXDC1Q6P996 788 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 RABGGTAQ92696 567 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 B3GALT6Q96L58 329 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 TTPALQ9BTX7 342 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 MMTAG2Q9BU76 263 aaKnown RBP22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 MRPL4Q9BYD3 311 aaKnown RBP22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 KMT5AQ9NQR1 393 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 SMC3Q9UQE7 1217 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 USP20Q9Y2K6 914 aa22.38■■□□□ 1.17
PDLIM4-206ENST00000474421 KIF4AO95239 1232 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 CDC25AP30304 524 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 HYIQ5T013 277 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 C1orf186Q6ZWK4 172 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 PALB2Q86YC2 1186 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 PAAF1Q9BRP4 392 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 RUSC1Q9BVN2 902 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 TOPORSQ9NS56 1045 aaPredicted RBP22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 ZDHHC7Q9NXF8 308 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 ARHGAP28Q9P2N2 729 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 MYH11P35749 1972 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 TRIP11Q15643 1979 aa22.37■■□□□ 1.17
PDLIM4-206ENST00000474421 TGM5O43548 720 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 PAPLNO95428 1278 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 BRD1O95696 1058 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 GUCY2CP25092 1073 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 YARSP54577 528 aaKnown RBP22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 NHLH1Q02575 133 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 ZRSR1Q15695 479 aaKnown RBP22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 NAB2Q15742 525 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 FAM171A1Q5VUB5 890 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 DAW1Q8N136 415 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms