RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 CXCL8P10145 99 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 ATP1A3P13637 1013 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 ZNF18P17022 549 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 HOXA11P31270 313 aaPredicted RBP9.07□□□□□ -0.96
CNN3-205ENST00000474409 TNFSF9P41273 254 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 ACOT2P49753 483 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 YARSP54577 528 aaKnown RBP9.07□□□□□ -0.96
CNN3-205ENST00000474409 PPP2R3AQ06190 1150 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 CYP24A1Q07973 514 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 BFSP1Q12934 665 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 SEZ6Q53EL9 994 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 PLEKHG4Q58EX7 1191 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 TCP11X2Q5H9J9 407 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 ZBTB41Q5SVQ8 909 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 INTS8Q75QN2 995 aaKnown RBP9.07□□□□□ -0.96
CNN3-205ENST00000474409 FRMD5Q7Z6J6 570 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 CBWD2Q8IUF1 395 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 BRSK2Q8IWQ3 736 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 ZSWIM2Q8NEG5 633 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 TMEM174Q8WUU8 243 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 TRIM43Q96BQ3 446 aaPredicted RBP9.07□□□□□ -0.96
CNN3-205ENST00000474409 FAM212AQ96EL1 285 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 OSBPL7Q9BZF2 842 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 HSD3B7Q9H2F3 369 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 TMX1Q9H3N1 280 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 NXF3Q9H4D5 531 aaKnown RBP9.07□□□□□ -0.96
CNN3-205ENST00000474409 MMRN2Q9H8L6 949 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 RPF1Q9H9Y2 349 aaKnown RBP9.07□□□□□ -0.96
CNN3-205ENST00000474409 GRPEL1Q9HAV7 217 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 METTL14Q9HCE5 456 aaKnown RBP9.07□□□□□ -0.96
CNN3-205ENST00000474409 FAM105AQ9NUU6 356 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 DMAC2Q9NW81 257 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 TAB2Q9NYJ8 693 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 ARMCX3Q9UH62 379 aaPredicted RBP9.07□□□□□ -0.96
CNN3-205ENST00000474409 PTPRDP23468 1912 aa9.07□□□□□ -0.96
CNN3-205ENST00000474409 RBAK-RBAKDNI3L0D1 243 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 MAPK13O15264 365 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 FAM189A1O60320 539 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 MGEA5O60502 916 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 RECQL4O94761 1208 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 CXCL10P02778 98 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 TPM3P06753 285 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 PFKMP08237 780 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 STAG3L1P0CL83 205 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 SKIP12755 728 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 GRM5P41594 1212 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 MARSP56192 900 aaKnown RBP9.06□□□□□ -0.96
CNN3-205ENST00000474409 PPIGQ13427 754 aaKnown RBP eCLIP9.06□□□□□ -0.96
CNN3-205ENST00000474409 KRT31Q15323 416 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 MAN2A1Q16706 1144 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 FILIP1LQ4L180 1135 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 UBXN11Q5T124 520 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 CNKSR3Q6P9H4 555 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 RNF169Q8NCN4 708 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 DBF4BQ8NFT6 615 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 DPF3Q92784 378 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 CCDC127Q96BQ5 260 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 FBXL18Q96ME1 805 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 ACAP3Q96P50 834 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 FNBP1Q96RU3 617 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 ADAM2Q99965 735 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 TOPORSQ9NS56 1045 aaPredicted RBP9.06□□□□□ -0.96
CNN3-205ENST00000474409 C1orf112Q9NSG2 853 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 PARP2Q9UGN5 583 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 CPSF3Q9UKF6 684 aaKnown RBP9.06□□□□□ -0.96
CNN3-205ENST00000474409 HES2Q9Y543 173 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 IPPQ9Y573 584 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 PCDHB2Q9Y5E7 798 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.06□□□□□ -0.96
CNN3-205ENST00000474409 PDE4DIPQ5VU43 2346 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 MYO16Q9Y6X6 1858 aa9.06□□□□□ -0.96
CNN3-205ENST00000474409 COL4A6Q14031 1691 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 FSD2A1L4K1 749 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 CBFA2T2O43439 604 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 CLSTN1O94985 981 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 IL18RAPO95256 599 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 CLTAP09496 248 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 TRIM49P0CI25 452 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 TRIM49CP0CI26 452 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 DLATP10515 647 aaKnown RBP9.05□□□□□ -0.96
CNN3-205ENST00000474409 ACTN1P12814 892 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 ITGA4P13612 1032 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 CSF2RAP15509 400 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 SYN1P17600 705 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 TNNI1P19237 187 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 ITGB8P26012 769 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 MRE11P49959 708 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 VAMP7P51809 220 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 COPB1P53618 953 aaKnown RBP9.05□□□□□ -0.96
CNN3-205ENST00000474409 FANCCQ00597 558 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 FPGSQ05932 587 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 DSC3Q14574 896 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 PSMD6Q15008 389 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 SURF1Q15526 300 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 ENOX2Q16206 610 aaKnown RBP9.05□□□□□ -0.96
CNN3-205ENST00000474409 MFSD5Q6N075 450 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 CRELD2Q6UXH1 353 aaPredicted RBP9.05□□□□□ -0.96
CNN3-205ENST00000474409 IRF2BP1Q8IU81 584 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 TRIM59Q8IWR1 403 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms