RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 RARRES1P49788 294 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 SCRN1Q12765 414 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 TUSC3Q13454 348 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 FAM187BQ17R55 369 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 UVSSAQ2YD98 709 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 RTL10Q7L3V2 364 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 OXER1Q8TDS5 423 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 PIK3R5Q8WYR1 880 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 WASF1Q92558 559 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 APOL6Q9BWW8 343 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 OSBPL6Q9BZF3 934 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 NXF3Q9H4D5 531 aaKnown RBP12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 PARP2Q9UGN5 583 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 FBXW11Q9UKB1 542 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 CDH7Q9ULB5 785 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 NUMBLQ9Y6R0 609 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 ARID2Q68CP9 1835 aa12.78□□□□□ -0.36
EXOSC1-207ENST00000474309 F5P12259 2224 aa12.77□□□□□ -0.36
EXOSC1-207ENST00000474309 NPTXRO95502 500 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 POU2F2P09086 479 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 RPL17P18621 184 aaKnown RBP12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 HSP90AA2PQ14568 343 aaPredicted RBP12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 ZNF528Q3MIS6 628 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 PDXDC1Q6P996 788 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 RSPO2Q6UXX9 243 aaPredicted RBP12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 MTSS1LQ765P7 747 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 GET4Q7L5D6 327 aaPredicted RBP12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 GLYCTKQ8IVS8 523 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 PJA1Q8NG27 643 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 B3GALT6Q96L58 329 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 TTPALQ9BTX7 342 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 FZD8Q9H461 694 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 PRMT7Q9NVM4 692 aaPredicted RBP12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 R4GN57 208 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 SF3B1O75533 1304 aaKnown RBP eCLIP12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 GPR179Q6PRD1 2367 aa12.77□□□□□ -0.37
EXOSC1-207ENST00000474309 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 KANSL1LA0AUZ9 987 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 B4GALT5O43286 388 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 PFKFB2O60825 505 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 THP07101 528 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 MAGEA9P43362 315 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 GPC5P78333 572 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 PRKCQQ04759 706 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 PUM1Q14671 1186 aaKnown RBP eCLIP12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 EARS2Q5JPH6 523 aaKnown RBP12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 SPECC1Q5M775 1068 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 RTP2Q5QGT7 225 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 PPM1LQ5SGD2 360 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 GRASPQ7Z6J2 395 aaPredicted RBP12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 RUBCNQ92622 972 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 TNFRSF25Q93038 417 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 RMDN1Q96DB5 314 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 RPP25Q9BUL9 199 aaKnown RBP12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 DDX23Q9BUQ8 820 aaKnown RBP12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 TTC12Q9H892 705 aaPredicted RBP12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 KLK14Q9P0G3 267 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 FBXO4Q9UKT5 387 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 MIA3Q5JRA6 1907 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 NOTCH4Q99466 2003 aa12.76□□□□□ -0.37
EXOSC1-207ENST00000474309 XYLBO75191 536 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 GLULP15104 373 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 KRT2P35908 639 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 PFKPQ01813 784 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 RAB33AQ14088 237 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 TRIP11Q15643 1979 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 CALCRLQ16602 461 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 SLC44A4Q53GD3 710 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 LIN9Q5TKA1 542 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 FAM171A1Q5VUB5 890 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 PRSS55Q6UWB4 352 aaPredicted RBP12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 WDR87Q6ZQQ6 2873 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 KIAA2013Q8IYS2 634 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 SUMF1Q8NBK3 374 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 MCPH1Q8NEM0 835 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 FGF14Q92915 247 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 CCDC43Q96MW1 224 aaKnown RBP12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 NELL2Q99435 816 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 PAAF1Q9BRP4 392 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 BRMS1Q9HCU9 246 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 GJB4Q9NTQ9 266 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 ORC3Q9UBD5 711 aaPredicted RBP12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 KCNH3Q9ULD8 1083 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 MYH15Q9Y2K3 1946 aa12.75□□□□□ -0.37
EXOSC1-207ENST00000474309 N4BP3O15049 544 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 CTDNEP1O95476 244 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 C8AP07357 584 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 NR5A1Q13285 461 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 NAB2Q15742 525 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 MLF2Q15773 248 aaPredicted RBP12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 PSMD5Q16401 504 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms