RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 NR2E1Q9Y466 385 aa16.48■□□□□ 0.23
VPS8-221ENST00000471655 CCDC169A6NNP5 214 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 RECQL4O94761 1208 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 SSBP05455 408 aaKnown RBP eCLIP16.47■□□□□ 0.23
VPS8-221ENST00000471655 THP07101 528 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 ADH1AP07327 375 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 LIG1P18858 919 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 PDCP20941 246 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 HSP90AA2PQ14568 343 aaPredicted RBP16.47■□□□□ 0.23
VPS8-221ENST00000471655 NAB2Q15742 525 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 USP41Q3LFD5 358 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 TMEM119Q4V9L6 283 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
VPS8-221ENST00000471655 FUT10Q6P4F1 479 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 SPIRE2Q8WWL2 714 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 ACO2Q99798 780 aaKnown RBP16.47■□□□□ 0.23
VPS8-221ENST00000471655 BACH2Q9BYV9 841 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 GPR62Q9BZJ7 368 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 POMKQ9H5K3 350 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 SFXN1Q9H9B4 322 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 PTPRHQ9HD43 1115 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 KMT5AQ9NQR1 393 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.47■□□□□ 0.23
VPS8-221ENST00000471655 FNIP2Q9P278 1114 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 DPP7Q9UHL4 492 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 RAPGEFL1Q9UHV5 662 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 USP20Q9Y2K6 914 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 HCN4Q9Y3Q4 1203 aa16.47■□□□□ 0.23
VPS8-221ENST00000471655 F8W810 466 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 TEX28O15482 410 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 TADA2AO75478 443 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 SLC12A3P55017 1021 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 ZXDAP98168 799 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 CYP26C1Q6V0L0 522 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 C15orf39Q6ZRI6 1047 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 TAS1R3Q7RTX0 852 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 BMP8AQ7Z5Y6 402 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 GPR149Q86SP6 731 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 C12orf76Q8N812 135 aaPredicted RBP16.46■□□□□ 0.23
VPS8-221ENST00000471655 CMASQ8NFW8 434 aaPredicted RBP16.46■□□□□ 0.23
VPS8-221ENST00000471655 HDAC7Q8WUI4 952 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 CDK5RAP3Q96JB5 506 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 MRPL4Q9BYD3 311 aaKnown RBP16.46■□□□□ 0.23
VPS8-221ENST00000471655 RHOBTB2Q9BYZ6 727 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 USTQ9Y2C2 406 aa16.46■□□□□ 0.23
VPS8-221ENST00000471655 C2CD2LO14523 706 aa16.45■□□□□ 0.22
VPS8-221ENST00000471655 PAPLNO95428 1278 aa16.45■□□□□ 0.22
VPS8-221ENST00000471655 BRD1O95696 1058 aa16.45■□□□□ 0.22
VPS8-221ENST00000471655 PLS3P13797 630 aa16.45■□□□□ 0.22
VPS8-221ENST00000471655 LONP1P36776 959 aaKnown RBP16.45■□□□□ 0.22
VPS8-221ENST00000471655 GRM5P41594 1212 aa16.45■□□□□ 0.22
VPS8-221ENST00000471655 CREMQ03060 361 aa16.45■□□□□ 0.22
VPS8-221ENST00000471655 ELMSAN1Q6PJG2 1045 aa16.45■□□□□ 0.22
VPS8-221ENST00000471655 KCNN1Q92952 543 aa16.45■□□□□ 0.22
VPS8-221ENST00000471655 PAAF1Q9BRP4 392 aa16.45■□□□□ 0.22
VPS8-221ENST00000471655 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.22
VPS8-221ENST00000471655 PLA2G4BP0C869 781 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 PROZP22891 400 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 UBA7P41226 1012 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 SMTNP53814 917 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 ELAVL2Q12926 359 aaKnown RBP16.44■□□□□ 0.22
VPS8-221ENST00000471655 ZRSR1Q15695 479 aaKnown RBP16.44■□□□□ 0.22
VPS8-221ENST00000471655 PTPN21Q16825 1174 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 XKR4Q5GH76 650 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 ALKAL1Q6UXT8 129 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 TRIM67Q6ZTA4 783 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 ZDHHC14Q8IZN3 488 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 CALML4Q96GE6 196 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 INTS4Q96HW7 963 aaKnown RBP16.44■□□□□ 0.22
VPS8-221ENST00000471655 PPP1R10Q96QC0 940 aaKnown RBP16.44■□□□□ 0.22
VPS8-221ENST00000471655 CDT1Q9H211 546 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 CXCL16Q9H2A7 254 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 CDH22Q9UJ99 828 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 GDAQ9Y2T3 454 aa16.44■□□□□ 0.22
VPS8-221ENST00000471655 CASTOR2A6NHX0 329 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 SFI1A8K8P3 1242 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 TMEM189-UBE2V1I3L0A0 370 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 ABLIM1O14639 778 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 SLC16A4O15374 487 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 GLUD1P00367 558 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 MCF2P10911 925 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 SCP2P22307 547 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 SF3A1Q15459 793 aaKnown RBP16.43■□□□□ 0.22
VPS8-221ENST00000471655 ARSHQ5FYA8 562 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 LILRA6Q6PI73 481 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 TMC5Q6UXY8 1006 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 PLCD3Q8N3E9 789 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 TMEM161BQ8NDZ6 487 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 UROC1Q96N76 676 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 PLIN2Q99541 437 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 CCDC94Q9BW85 323 aaPredicted RBP16.43■□□□□ 0.22
VPS8-221ENST00000471655 TARS2Q9BW92 718 aaKnown RBP16.43■□□□□ 0.22
VPS8-221ENST00000471655 PLEKHA4Q9H4M7 779 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 TOPORSQ9NS56 1045 aaPredicted RBP16.43■□□□□ 0.22
VPS8-221ENST00000471655 ODF2LQ9ULJ1 636 aa16.43■□□□□ 0.22
VPS8-221ENST00000471655 C2CD4DB7Z1M9 353 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 H0YCG3 227 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 KIF4AO95239 1232 aa16.42■□□□□ 0.22
VPS8-221ENST00000471655 WEE2P0C1S8 567 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms