RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 ARHGAP28Q9P2N2 729 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 SUCLA2Q9P2R7 463 aaPredicted RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 SLC9A2Q9UBY0 812 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 TCEAL9Q9UHQ7 104 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 EXOC7Q9UPT5 735 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 CUL9Q8IWT3 2517 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 SYNGAP1Q96PV0 1343 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 A0A0C4DFX4 3053 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 RANBP2P49792 3224 aaKnown RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 DENND3A2RUS2 1198 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 GOLGA8IPA6NC78 632 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 GOLGA8JA6NMD2 632 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 AGPSO00116 658 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 POLR3GO15318 223 aaPredicted RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 DDX3YO15523 660 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 TRPA1O75762 1119 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CLSTN1O94985 981 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CCDC172P0C7W6 258 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CHRNB2P17787 502 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 GARTP22102 1010 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CNGA1P29973 690 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 GTF2H1P32780 548 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CYP2C19P33261 490 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 MXI1P50539 228 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 GPC3P51654 580 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SMTNP53814 917 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SLC7A5Q01650 507 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 PRKCEQ02156 737 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 VGLL4Q14135 290 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SNRNP35Q16560 246 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 ARHGAP44Q17R89 818 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 GNPTABQ3T906 1256 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 TREML2Q5T2D2 321 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CCDC70Q6NSX1 233 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SWSAP1Q6NVH7 229 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 C8orf74Q6P047 294 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.93□□□□□ -1.3
SPEN-204ENST00000471538 FAM71AQ8IYT1 594 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 METTL13Q8N6R0 699 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 MCPH1Q8NEM0 835 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 FAM71BQ8TC56 605 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 HELQQ8TDG4 1101 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SLC20A1Q8WUM9 679 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SHC3Q92529 594 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SEMA4DQ92854 862 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 KAT5Q92993 513 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CAVIN3Q969G5 261 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 ARHGEF26Q96DR7 871 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 KREMEN1Q96MU8 473 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CCDC43Q96MW1 224 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 ISCUQ9H1K1 167 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 GOLPH3Q9H4A6 298 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 TMEM8AQ9HCN3 771 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 UBE2TQ9NPD8 197 aaPredicted RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 OSGEPQ9NPF4 335 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 MED4Q9NPJ6 270 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 KMT5AQ9NQR1 393 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CYP26B1Q9NR63 512 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SAGE1Q9NXZ1 904 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 PSD3Q9NYI0 1048 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 NOCTQ9UK39 431 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 MAFBQ9Y5Q3 323 aaPredicted RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 STYXL1Q9Y6J8 313 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 ZNFX1Q9P2E3 1918 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 ANKRD62A6NC57 917 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CCDC169A6NNP5 214 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 ADM5C9JUS6 153 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 KCNK3O14649 394 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 IRF6O14896 467 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 BUB1BO60566 1050 aaPredicted RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 CNMDO75829 334 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 MTA2O94776 668 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 PIGRP01833 764 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 GLI1P08151 1106 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 TNFAIP3P21580 790 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 NF2P35240 595 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 MATR3P43243 847 aaKnown RBP eCLIP6.93□□□□□ -1.3
SPEN-204ENST00000471538 NOP2P46087 812 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 ALDH5A1P51649 535 aaPredicted RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 EPHB4P54760 987 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CLDN10P78369 228 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 MRPS25P82663 173 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 CNTN2Q02246 1040 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CYP24A1Q07973 514 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CETN1Q12798 172 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 GPS2Q13227 327 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 NNTQ13423 1086 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CAMK2BQ13554 666 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 BRDTQ58F21 947 aaPredicted RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 XKR3Q5GH77 459 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 KRT39Q6A163 491 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 RGMBQ6NW40 437 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 MIS18BP1Q6P0N0 1132 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 EMBQ6PCB8 327 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 C15orf39Q6ZRI6 1047 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CTU1Q7Z7A3 348 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 RIOX2Q8IUF8 465 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SYCE1Q8N0S2 351 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SLC35G2Q8TBE7 412 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 EPS8L1Q8TE68 723 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms