RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 VSIG10LQ86VR7 867 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 SELENOSQ9BQE4 189 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 JPH1Q9HDC5 661 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-221ENST00000469415 XPNPEP1Q9NQW7 623 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 NOCTQ9UK39 431 aaKnown RBP19.15■□□□□ 0.66
MCF2L-221ENST00000469415 PLA2G6O60733 806 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 RTN2O75298 545 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 FKBP1CQ5VVH2 108 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 CCDC50Q8IVM0 306 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 RHOT2Q8IXI1 618 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 PWWP2AQ96N64 755 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 TCHPQ9BT92 498 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 A1CFQ9NQ94 594 aaKnown RBP19.15■□□□□ 0.66
MCF2L-221ENST00000469415 EXOC7Q9UPT5 735 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 NCANO14594 1321 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 JAK3P52333 1124 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 NLRP11P59045 1033 aaKnown RBP19.14■□□□□ 0.66
MCF2L-221ENST00000469415 NFIL3Q16649 462 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 ZBTB33Q86T24 672 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 ZNF280CQ8ND82 737 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 HELQQ8TDG4 1101 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 ZBTB10Q96DT7 871 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 ZSWIM1Q9BR11 485 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 ERP44Q9BS26 406 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 CARD9Q9H257 536 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 SEMA4AQ9H3S1 761 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 SLITRK6Q9H5Y7 841 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 TMBIM4Q9HC24 238 aa19.14■□□□□ 0.66
MCF2L-221ENST00000469415 SHOX2O60902 331 aaPredicted RBP19.14■□□□□ 0.65
MCF2L-221ENST00000469415 OTUD6AQ7L8S5 288 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 FAM71AQ8IYT1 594 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 ATP8B4Q8TF62 1192 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 TARS2Q9BW92 718 aaKnown RBP19.14■□□□□ 0.65
MCF2L-221ENST00000469415 PNMA2Q9UL42 364 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 CAND2O75155 1236 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 RRM1P23921 792 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 RPL21P46778 160 aaKnown RBP19.14■□□□□ 0.65
MCF2L-221ENST00000469415 PTENP60484 403 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 OSTNP61366 133 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 PPP1R7Q15435 360 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 WDR78Q5VTH9 848 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 ZNF516Q92618 1163 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 RUBCNQ92622 972 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 CEP89Q96ST8 783 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 C11orf70Q9BRQ4 267 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 SLC9A2Q9UBY0 812 aa19.14■□□□□ 0.65
MCF2L-221ENST00000469415 PTPRAP18433 802 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 MUTP22033 750 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 NCKAP1LP55160 1127 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 ANKRD35Q8N283 1001 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 TMEM130Q8N3G9 435 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 PPP1R16BQ96T49 567 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 PAGR1Q9BTK6 254 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 RARAP10276 462 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 SLC29A2Q14542 456 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 NSUN6Q8TEA1 469 aaKnown RBP19.13■□□□□ 0.65
MCF2L-221ENST00000469415 IFT74Q96LB3 600 aa19.13■□□□□ 0.65
MCF2L-221ENST00000469415 RPS6KA5O75582 802 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 CD58P19256 250 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 MDH1P40925 334 aaKnown RBP19.12■□□□□ 0.65
MCF2L-221ENST00000469415 CYP24A1Q07973 514 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 TMEM270Q6UE05 265 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 MAP4K3Q8IVH8 894 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 KCTD17Q8N5Z5 321 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 TRPM4Q8TD43 1214 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 ATP6V0A1Q93050 837 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 ACSF2Q96CM8 615 aaPredicted RBP19.12■□□□□ 0.65
MCF2L-221ENST00000469415 CYFIP2Q96F07 1278 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 ZBED3Q96IU2 234 aaPredicted RBP19.12■□□□□ 0.65
MCF2L-221ENST00000469415 R3HDMLQ9H3Y0 253 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 CYP26B1Q9NR63 512 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 PTPRJQ12913 1337 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 H0YGN5 161 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 ANXA13P27216 316 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 MAPK4P31152 587 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 POU5F1Q01860 360 aaKnown RBP19.12■□□□□ 0.65
MCF2L-221ENST00000469415 IFT88Q13099 833 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 DRP2Q13474 957 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 SHC3Q92529 594 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 CCDC114Q96M63 670 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 RAB17Q9H0T7 212 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 TMEM8AQ9HCN3 771 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 MLXIPLQ9NP71 852 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 NFS1Q9Y697 457 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 UMODL1Q5DID0 1318 aa19.12■□□□□ 0.65
MCF2L-221ENST00000469415 TTLL13PA6NNM8 815 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 ACSL3O95573 720 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 PIK3CAP42336 1068 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 TAS1R3Q7RTX0 852 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 GPD1LQ8N335 351 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 MREGQ8N565 214 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 TAB3Q8N5C8 712 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-221ENST00000469415 FAM114A2Q9NRY5 505 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 C1orf112Q9NSG2 853 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 CES2O00748 559 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 MAPTP10636 758 aaKnown RBP19.11■□□□□ 0.65
MCF2L-221ENST00000469415 KCNA2P16389 499 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 SCP2P22307 547 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 SFNP31947 248 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 IFNAR2P48551 515 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms