RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 ZCCHC17Q9NP64 241 aaKnown RBP8.22□□□□□ -1.09
COL6A3-208ENST00000468792 NOCTQ9UK39 431 aaKnown RBP8.22□□□□□ -1.09
COL6A3-208ENST00000468792 AGO2Q9UKV8 859 aaKnown RBP8.22□□□□□ -1.09
COL6A3-208ENST00000468792 CNTN6Q9UQ52 1028 aa8.22□□□□□ -1.09
COL6A3-208ENST00000468792 TELO2Q9Y4R8 837 aa8.22□□□□□ -1.09
COL6A3-208ENST00000468792 COL1A2P08123 1366 aa8.22□□□□□ -1.09
COL6A3-208ENST00000468792 DOCK5Q9H7D0 1870 aa8.21□□□□□ -1.09
COL6A3-208ENST00000468792 ZNFX1Q9P2E3 1918 aaKnown RBP8.21□□□□□ -1.09
COL6A3-208ENST00000468792 NOP56O00567 594 aaKnown RBP8.21□□□□□ -1.1
COL6A3-208ENST00000468792 MAGEB2O15479 319 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 BUB1O43683 1085 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 MSCO60682 206 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 ARIH2O95376 493 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 HOXC6P09630 235 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 HOXD8P13378 290 aaPredicted RBP8.21□□□□□ -1.1
COL6A3-208ENST00000468792 PROZP22891 400 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 NAP1L1P55209 391 aaKnown RBP8.21□□□□□ -1.1
COL6A3-208ENST00000468792 SOX10P56693 466 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 GPC5P78333 572 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 CDR2Q01850 454 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 MCL1Q07820 350 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 CAPSQ13938 189 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 TFDP1Q14186 410 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 PLCB4Q15147 1175 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 FAM187BQ17R55 369 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 LY6KQ17RY6 165 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 HSDL1Q3SXM5 330 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 CCDC181Q5TID7 509 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 C11orf63Q6NUN7 778 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 NFRKBQ6P4R8 1299 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 CRELD2Q6UXH1 353 aaPredicted RBP8.21□□□□□ -1.1
COL6A3-208ENST00000468792 TSHZ1Q6ZSZ6 1077 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 MOB2Q70IA6 237 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 HDXQ7Z353 690 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 GLYCTKQ8IVS8 523 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 ARHGEF19Q8IW93 802 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 ZBTB8OSQ8IWT0 167 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 ANKRD13CQ8N6S4 541 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 ZSWIM2Q8NEG5 633 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 TAS1R2Q8TE23 839 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 COG1Q8WTW3 980 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 U2AF1L4Q8WU68 220 aaKnown RBP8.21□□□□□ -1.1
COL6A3-208ENST00000468792 PRPF31Q8WWY3 499 aaKnown RBP8.21□□□□□ -1.1
COL6A3-208ENST00000468792 TAF4BQ92750 862 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 SEMA4DQ92854 862 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 TMEM143Q96AN5 459 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 SAAL1Q96ER3 474 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 BICD1Q96G01 975 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 PKNOX2Q96KN3 472 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 FNBP1Q96RU3 617 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 RPS6KC1Q96S38 1066 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 PNKPQ96T60 521 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 CGRRF1Q99675 332 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 FAM213AQ9BRX8 229 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 SELENOOQ9BVL4 669 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 MRPL4Q9BYD3 311 aaKnown RBP8.21□□□□□ -1.1
COL6A3-208ENST00000468792 FZD8Q9H461 694 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 ERAP1Q9NZ08 941 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 CNTNAP2Q9UHC6 1331 aa8.21□□□□□ -1.1
COL6A3-208ENST00000468792 GOLGA8IPA6NC78 632 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 LRRIQ4A6NIV6 560 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 GOLGA8JA6NMD2 632 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 MIF4GDA9UHW6 222 aaKnown RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 CCDC188H7C350 402 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 PDHXO00330 501 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 ACKR2O00590 384 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 ZNF185O15231 689 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 CLDN3O15551 220 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 FAM189A1O60320 539 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 PPFIA4O75335 1185 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 PGK2P07205 417 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 TXNP10599 105 aaKnown RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 CYP11B1P15538 503 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 CHRNB2P17787 502 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 TBXAS1P24557 533 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 NOP2P46087 812 aaKnown RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 VSNL1P62760 191 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 SP4Q02446 784 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 MAP2K1Q02750 393 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 GABPB1Q06547 395 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 ARHGAP1Q07960 439 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 LAMTOR4Q0VGL1 99 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 GRB14Q14449 540 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 MAPK6Q16659 721 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 KYAT1Q16773 422 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 ARHGAP44Q17R89 818 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 FAM110CQ1W6H9 321 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 WDR44Q5JSH3 913 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 TAPT1Q6NXT6 567 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 CCNI2Q6ZMN8 369 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 TRIM72Q6ZMU5 477 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 ARMCX2Q7L311 632 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 PEX26Q7Z412 305 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 NT5DC3Q86UY8 548 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 WDR49Q8IV35 697 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 BRSK2Q8IWQ3 736 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 PPM1KQ8N3J5 372 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 USP38Q8NB14 1042 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 PPTC7Q8NI37 304 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 SLC35G2Q8TBE7 412 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms