RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 GNAT1P11488 350 aa11□□□□□ -0.65
MSH5-213ENST00000468136 SMPD1P17405 629 aa11□□□□□ -0.65
MSH5-213ENST00000468136 TNNI1P19237 187 aa11□□□□□ -0.65
MSH5-213ENST00000468136 PROZP22891 400 aa11□□□□□ -0.65
MSH5-213ENST00000468136 KLRC1P26715 233 aa11□□□□□ -0.65
MSH5-213ENST00000468136 DLG4P78352 724 aa11□□□□□ -0.65
MSH5-213ENST00000468136 ITIH3Q06033 890 aa11□□□□□ -0.65
MSH5-213ENST00000468136 GFPT1Q06210 699 aaPredicted RBP11□□□□□ -0.65
MSH5-213ENST00000468136 PPFIA1Q13136 1202 aa11□□□□□ -0.65
MSH5-213ENST00000468136 PRPF4BQ13523 1007 aaKnown RBP11□□□□□ -0.65
MSH5-213ENST00000468136 TCEAL1Q15170 157 aa11□□□□□ -0.65
MSH5-213ENST00000468136 KIAA0753Q2KHM9 967 aa11□□□□□ -0.65
MSH5-213ENST00000468136 PHLDB3Q6NSJ2 640 aa11□□□□□ -0.65
MSH5-213ENST00000468136 TRAPPC11Q7Z392 1133 aa11□□□□□ -0.65
MSH5-213ENST00000468136 RHPN2Q8IUC4 686 aa11□□□□□ -0.65
MSH5-213ENST00000468136 CD302Q8IX05 232 aa11□□□□□ -0.65
MSH5-213ENST00000468136 SLC30A5Q8TAD4 765 aa11□□□□□ -0.65
MSH5-213ENST00000468136 NPLOC4Q8TAT6 608 aa11□□□□□ -0.65
MSH5-213ENST00000468136 RABGGTAQ92696 567 aa11□□□□□ -0.65
MSH5-213ENST00000468136 COPS5Q92905 334 aa11□□□□□ -0.65
MSH5-213ENST00000468136 CCDC127Q96BQ5 260 aa11□□□□□ -0.65
MSH5-213ENST00000468136 TSPAN18Q96SJ8 248 aa11□□□□□ -0.65
MSH5-213ENST00000468136 TCHPQ9BT92 498 aa11□□□□□ -0.65
MSH5-213ENST00000468136 AP5M1Q9H0R1 490 aa11□□□□□ -0.65
MSH5-213ENST00000468136 IKZF4Q9H2S9 585 aa11□□□□□ -0.65
MSH5-213ENST00000468136 ARGLU1Q9NWB6 273 aaPredicted RBP11□□□□□ -0.65
MSH5-213ENST00000468136 CPA4Q9UI42 421 aa11□□□□□ -0.65
MSH5-213ENST00000468136 GNEQ9Y223 722 aaKnown RBP11□□□□□ -0.65
MSH5-213ENST00000468136 PCDHGC5Q9Y5F6 944 aa11□□□□□ -0.65
MSH5-213ENST00000468136 A0A087X0T9 212 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
MSH5-213ENST00000468136 CTAGE15A4D2H0 777 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 ANKRD62A6NC57 917 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 TISP43B9A030 160 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 TNPO2O14787 897 aaKnown RBP10.99□□□□□ -0.65
MSH5-213ENST00000468136 B4GALT4O60513 344 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 TADA3O75528 432 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 F2P00734 622 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 TMEM253P0C7T8 217 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 FAM228BP0C875 321 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 CTAGE8P0CG41 777 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 SRGAP2CP0DJJ0 459 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 DLATP10515 647 aaKnown RBP10.99□□□□□ -0.65
MSH5-213ENST00000468136 MCM3P25205 808 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 HADHBP55084 474 aaKnown RBP10.99□□□□□ -0.65
MSH5-213ENST00000468136 FCGRTP55899 365 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 YWHAEP62258 255 aaKnown RBP10.99□□□□□ -0.65
MSH5-213ENST00000468136 AMPD2Q01433 879 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 MAP2K1Q02750 393 aaPredicted RBP10.99□□□□□ -0.65
MSH5-213ENST00000468136 ARID5AQ03989 594 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
MSH5-213ENST00000468136 CLUL1Q15846 466 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 DUOXA2Q1HG44 320 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 ATF7IP2Q5U623 682 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 MTHFD1LQ6UB35 978 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 TRIM72Q6ZMU5 477 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 CTAGE6Q86UF2 777 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 TRIM50Q86XT4 487 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 CTAGE4Q8IX94 777 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 RHOT2Q8IXI1 618 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 NME8Q8N427 588 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 METTL13Q8N6R0 699 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 GPR161Q8N6U8 529 aaKnown RBP10.99□□□□□ -0.65
MSH5-213ENST00000468136 PLEKHO2Q8TD55 490 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 ANKRD7Q92527 254 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 RUBCNQ92622 972 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 AGPAT1Q99943 283 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 SYT11Q9BT88 431 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 GPR88Q9GZN0 384 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 RNPEPQ9H4A4 650 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 PTPRHQ9HD43 1115 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 HYOU1Q9Y4L1 999 aa10.99□□□□□ -0.65
MSH5-213ENST00000468136 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.99□□□□□ -0.65
MSH5-213ENST00000468136 MCM3APO60318 1980 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 SMIM35A0A1B0GVV1 85 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 MACROD2A1Z1Q3 448 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 TMEM88BA6NKF7 163 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 FAM155AB1AL88 458 aaPredicted RBP10.98□□□□□ -0.65
MSH5-213ENST00000468136 INO80B-WBP1J3KQ70 363 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 FOXN3O00409 490 aaPredicted RBP10.98□□□□□ -0.65
MSH5-213ENST00000468136 IGHA2P01877 340 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 CLTAP09496 248 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 ZNF865P0CJ78 1059 aaPredicted RBP10.98□□□□□ -0.65
MSH5-213ENST00000468136 AKR1A1P14550 325 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 AXLP30530 894 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 PDE6CP51160 858 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 NAP1L1P55209 391 aaKnown RBP10.98□□□□□ -0.65
MSH5-213ENST00000468136 NLRP11P59045 1033 aaKnown RBP10.98□□□□□ -0.65
MSH5-213ENST00000468136 CHMP4BP1P59074 171 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 MBTD1Q05BQ5 628 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 NOGQ13253 232 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 GRIK4Q16099 956 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 DCAF4L1Q3SXM0 396 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 MFSD14CQ5VZR4 134 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 CCDC70Q6NSX1 233 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 CRELD2Q6UXH1 353 aaPredicted RBP10.98□□□□□ -0.65
MSH5-213ENST00000468136 PPM1KQ8N3J5 372 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 LRRC71Q8N4P6 559 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 TTC39CQ8N584 583 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 HELQQ8TDG4 1101 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms