RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	TCHP	Q9BT92	498 aa		13.32	□□□□□ -0.28
HDLBP-231	ENST00000467435	HAUS4	Q9H6D7	363 aa		13.32	□□□□□ -0.28
HDLBP-231	ENST00000467435	MINDY3	Q9H8M7	445 aa		13.32	□□□□□ -0.28
HDLBP-231	ENST00000467435	IFT122	Q9HBG6	1241 aa		13.32	□□□□□ -0.28
HDLBP-231	ENST00000467435	COQ4	Q9Y3A0	265 aa		13.32	□□□□□ -0.28
HDLBP-231	ENST00000467435	TRIP12	Q14669	1992 aa	Predicted RBP	13.32	□□□□□ -0.28
HDLBP-231	ENST00000467435	NRCAM	Q92823	1304 aa		13.32	□□□□□ -0.28
HDLBP-231	ENST00000467435	RBAK-RBAKDN	I3L0D1	243 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	HAS3	O00219	553 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	OGT	O15294	1046 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	FAM189A1	O60320	539 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	LRRN2	O75325	713 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	GFPT2	O94808	682 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	PNMA6A	P0CW24	399 aa	Predicted RBP	13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	TNNI1	P19237	187 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	PRKCI	P41743	596 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	WNT7B	P56706	349 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	CLDN10	P78369	228 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	GFPT1	Q06210	699 aa	Predicted RBP	13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	ARHGAP44	Q17R89	818 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	SEZ6	Q53EL9	994 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	C15orf39	Q6ZRI6	1047 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	ZNF662	Q6ZS27	426 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	SV2A	Q7L0J3	742 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	IRF2BP2	Q7Z5L9	587 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	ZNF410	Q86VK4	478 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	FBXL13	Q8NEE6	735 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	TAS1R2	Q8TE23	839 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	SEMA4D	Q92854	862 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	VTI1A	Q96AJ9	217 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	NT5C1B	Q96P26	610 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	IFIH1	Q9BYX4	1025 aa	Known RBP	13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	TSGA10	Q9BZW7	698 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	GPR88	Q9GZN0	384 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	PDE11A	Q9HCR9	933 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	TRIM10	Q9UDY6	481 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	TFR2	Q9UP52	801 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	TNFSF13B	Q9Y275	285 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	PCDHA13	Q9Y5I0	950 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	BZW2	Q9Y6E2	419 aa	Known RBP	13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	SCN10A	Q9Y5Y9	1956 aa		13.31	□□□□□ -0.28
HDLBP-231	ENST00000467435	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	MYADML2	A6NDP7	307 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	KRT86	O43790	486 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	ABL1	P00519	1130 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	C6orf222	P0C671	652 aa	Predicted RBP	13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	CYP2C9	P11712	490 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	CASQ1	P31415	396 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	TNFSF9	P41273	254 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	PIK3CA	P42336	1068 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	GJA9	P57773	515 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	CAP1	Q01518	475 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	SLC18A3	Q16572	532 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	AMHR2	Q16671	573 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	CCDC122	Q5T0U0	273 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	EEF1DP3	Q658K8	133 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	KIAA0319L	Q8IZA0	1049 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	TXLNB	Q8N3L3	684 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	PPP1R13L	Q8WUF5	828 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	FAM84A	Q96KN4	292 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	WDR24	Q96S15	920 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	CFHR5	Q9BXR6	569 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	IRX2	Q9BZI1	471 aa	Predicted RBP	13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	UPF3A	Q9H1J1	476 aa	Known RBP	13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	CDT1	Q9H211	546 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	PTPRH	Q9HD43	1115 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	RAB20	Q9NX57	234 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	CPSF3	Q9UKF6	684 aa	Known RBP	13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	GUCA1B	Q9UMX6	200 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	PTPRJ	Q12913	1337 aa		13.3	□□□□□ -0.28
HDLBP-231	ENST00000467435	CIT	O14578	2027 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	SMIM35	A0A1B0GVV1	85 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	RCCD1	A6NED2	376 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	RIOK3	O14730	519 aa	Known RBP	13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	FANCG	O15287	622 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	EVI5	O60447	810 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	KPNA6	O60684	536 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	ERLIN2	O94905	339 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	IQCF3	P0C7M6	154 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	CCDC172	P0C7W6	258 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	ANXA13	P27216	316 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	MAGEA1	P43355	309 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	TERF1	P54274	439 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	PURA	Q00577	322 aa	Known RBP	13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	PTK2	Q05397	1052 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	KIF5A	Q12840	1032 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	TRIM32	Q13049	653 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	BIRC3	Q13489	604 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	ZACN	Q401N2	412 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	ZNF569	Q5MCW4	686 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	TDRD10	Q5VZ19	366 aa	Known RBP	13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	RUFY4	Q6ZNE9	571 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	SRGAP1	Q7Z6B7	1085 aa		13.29	□□□□□ -0.28
HDLBP-231	ENST00000467435	VPS36	Q86VN1	386 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms