RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 ERVFC1P60507 584 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 COASYQ13057 564 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 PPP2R5CQ13362 524 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 NONOQ15233 471 aaKnown RBP eCLIP7.9□□□□□ -1.14
SND1-205ENST00000467238 DUSP6Q16828 381 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 LETM2Q2VYF4 491 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 MTERF2Q49AM1 385 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 RBM23Q86U06 439 aaKnown RBP7.9□□□□□ -1.14
SND1-205ENST00000467238 ECHDC2Q86YB7 292 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 THNSL1Q8IYQ7 743 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 LRRC43Q8N309 656 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 SCLT1Q96NL6 688 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 POP1Q99575 1024 aaKnown RBP7.9□□□□□ -1.14
SND1-205ENST00000467238 SH2D3AQ9BRG2 576 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 PHF20Q9BVI0 1012 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 KCNMB3Q9NPA1 279 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 GJB4Q9NTQ9 266 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 DACT1Q9NYF0 836 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 DDX25Q9UHL0 483 aaKnown RBP7.9□□□□□ -1.14
SND1-205ENST00000467238 GDF2Q9UK05 429 aaPredicted RBP7.9□□□□□ -1.14
SND1-205ENST00000467238 VAV3Q9UKW4 847 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 TPCN1Q9ULQ1 816 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 LZTS1Q9Y250 596 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 HCN4Q9Y3Q4 1203 aa7.9□□□□□ -1.14
SND1-205ENST00000467238 PLXNA3P51805 1871 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 A0A087WZ62 844 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 CCDC194A0A1B0GVG4 234 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 FSD2A1L4K1 749 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 EML1O00423 815 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 C2CD2LO14523 706 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 PER2O15055 1255 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 MAFO75444 373 aaPredicted RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 CSDE1O75534 798 aaKnown RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 CTDNEP1O95476 244 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 EOMESO95936 686 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 GCFC2P16383 781 aaKnown RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 PPM1AP35813 382 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 ANAPC15P60006 121 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 PSMC5P62195 406 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 RBM10P98175 930 aaKnown RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 CDC42EP1Q00587 391 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 PLCB3Q01970 1234 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 UBAP2LQ14157 1087 aaKnown RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 RSPO4Q2I0M5 234 aaPredicted RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 CLLU1OSQ5K130 101 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 PLA2G4FQ68DD2 849 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 PPP4R3AQ6IN85 833 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 PDE12Q6L8Q7 609 aaKnown RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 KCNT2Q6UVM3 1135 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 ANO5Q75V66 913 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 NEK8Q86SG6 692 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 ZNF410Q86VK4 478 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 ABI1Q8IZP0 508 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 PHTF2Q8N3S3 785 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 VN1R2Q8NFZ6 395 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 MICAL1Q8TDZ2 1067 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 MRPS27Q92552 414 aaKnown RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 FAM122AQ96E09 287 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 FAM20AQ96MK3 541 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 CDCA3Q99618 268 aaPredicted RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 FDXACB1Q9BRP7 624 aaPredicted RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 GCOM2Q9BZD3 368 aaPredicted RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 GRIP2Q9C0E4 1043 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 SLKQ9H2G2 1235 aaPredicted RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 TLE6Q9H808 572 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 CHST12Q9NRB3 414 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 BARX2Q9UMQ3 279 aaPredicted RBP7.89□□□□□ -1.15
SND1-205ENST00000467238 VWA8A3KMH1 1905 aa7.89□□□□□ -1.15
SND1-205ENST00000467238 TBX3O15119 743 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 ATP9BO43861 1147 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 CCNT1O60563 726 aaKnown RBP7.88□□□□□ -1.15
SND1-205ENST00000467238 DTNBO60941 627 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 NEFLP07196 543 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 XBP1P17861 261 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 SFPQP23246 707 aaKnown RBP eCLIP7.88□□□□□ -1.152e-8■□□□□ 10.1
SND1-205ENST00000467238 PBX3P40426 434 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 PHKA2P46019 1235 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 QARSP47897 775 aaKnown RBP7.88□□□□□ -1.15
SND1-205ENST00000467238 DGKGP49619 791 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 DNM2P50570 870 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 AK2P54819 239 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 CLN3Q13286 438 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 KCNC3Q14003 757 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 HERC4Q5GLZ8 1057 aaPredicted RBP7.88□□□□□ -1.15
SND1-205ENST00000467238 EARS2Q5JPH6 523 aaKnown RBP7.88□□□□□ -1.15
SND1-205ENST00000467238 WDR44Q5JSH3 913 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 ARTNQ5T4W7 220 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 PLPP4Q5VZY2 271 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 TMEM184AQ6ZMB5 413 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 PIK3AP1Q6ZUJ8 805 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 RHPN2Q8IUC4 686 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 RNF135Q8IUD6 432 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 KSR1Q8IVT5 923 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 RNF169Q8NCN4 708 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 HELQQ8TDG4 1101 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 SUSD6Q92537 303 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 HAS1Q92839 578 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 ZNF558Q96NG5 402 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 TCF25Q9BQ70 676 aa7.88□□□□□ -1.15
SND1-205ENST00000467238 JPH2Q9BR39 696 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms