RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 HES2Q9Y543 173 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 INSL6Q9Y581 213 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 HARSP12081 509 aaKnown RBP17.44■□□□□ 0.38
GPC1-207ENST00000466624 YARSP54577 528 aaKnown RBP17.44■□□□□ 0.38
GPC1-207ENST00000466624 CLLU1OSQ5K130 101 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 SASS6Q6UVJ0 657 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 GLB1LQ6UWU2 654 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 GPD1LQ8N335 351 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 RNF169Q8NCN4 708 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 LPPQ93052 612 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 P2RX5Q93086 422 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 FBXL18Q96ME1 805 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 ACAP3Q96P50 834 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 RAD9AQ99638 391 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 SEMA6BQ9H3T3 888 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 DMAC2Q9NW81 257 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 HSPBP1Q9NZL4 362 aa17.44■□□□□ 0.38
GPC1-207ENST00000466624 COLQQ9Y215 455 aaPredicted RBP17.44■□□□□ 0.38
GPC1-207ENST00000466624 BICDL2A1A5D9 508 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 MEIS3P2A8K0S8 358 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 CLIC2O15247 247 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 EXTL3O43909 919 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 OFD1O75665 1012 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 RECQL4O94761 1208 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 ADRB2P07550 413 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 FGFR1P11362 822 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 AKAP5P24588 427 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 LRIT3Q3SXY7 679 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 XKR4Q5GH76 650 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 TMCO2Q7Z6W1 182 aaPredicted RBP17.43■□□□□ 0.38
GPC1-207ENST00000466624 CD302Q8IX05 232 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 CMTR2Q8IYT2 770 aaKnown RBP17.43■□□□□ 0.38
GPC1-207ENST00000466624 ABI1Q8IZP0 508 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 XXYLT1Q8NBI6 393 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
GPC1-207ENST00000466624 CASD1Q96PB1 797 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 TSPAN18Q96SJ8 248 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 TSG101Q99816 390 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 ZBED2Q9BTP6 218 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 APOL6Q9BWW8 343 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 MRPL9Q9BYD2 267 aaKnown RBP17.43■□□□□ 0.38
GPC1-207ENST00000466624 PLEKHA5Q9HAU0 1116 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 KANSL3Q9P2N6 904 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 PARP2Q9UGN5 583 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 PCDHA11Q9Y5I1 949 aa17.43■□□□□ 0.38
GPC1-207ENST00000466624 KIAA1671Q9BY89 1806 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 NLRC5Q86WI3 1866 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 ARL5CA6NH57 179 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 TLL1O43897 1013 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 NR3C1P04150 777 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 IBSPP21815 317 aaPredicted RBP17.42■□□□□ 0.38
GPC1-207ENST00000466624 RPL13P26373 211 aaKnown RBP17.42■□□□□ 0.38
GPC1-207ENST00000466624 MLH1P40692 756 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 TNFSF9P41273 254 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 OSTNP61366 133 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 SMAD3P84022 425 aaKnown RBP17.42■□□□□ 0.38
GPC1-207ENST00000466624 PAK1Q13153 545 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 STX1AQ16623 288 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 DPCR1Q3MIW9 517 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 FAM117BQ6P1L5 589 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 CRELD2Q6UXH1 353 aaPredicted RBP17.42■□□□□ 0.38
GPC1-207ENST00000466624 ALKAL1Q6UXT8 129 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 ZC3H3Q8IXZ2 948 aaKnown RBP17.42■□□□□ 0.38
GPC1-207ENST00000466624 TMEM192Q8IY95 271 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 URGCPQ8TCY9 931 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 HELQQ8TDG4 1101 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 NELFBQ8WX92 580 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 SAAL1Q96ER3 474 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 SNX27Q96L92 541 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 YME1L1Q96TA2 773 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 PCIF1Q9H4Z3 704 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 RPF1Q9H9Y2 349 aaKnown RBP17.42■□□□□ 0.38
GPC1-207ENST00000466624 ANO10Q9NW15 660 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 CNTN3Q9P232 1028 aa17.42■□□□□ 0.38
GPC1-207ENST00000466624 RANBP2P49792 3224 aaKnown RBP17.42■□□□□ 0.38
GPC1-207ENST00000466624 TTC26A0AVF1 554 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 MAPK13O15264 365 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 NR2F2P24468 414 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 ERCC5P28715 1186 aaPredicted RBP17.41■□□□□ 0.38
GPC1-207ENST00000466624 ACOT2P49753 483 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 CYP2J2P51589 502 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 RAB30Q15771 203 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 ENOX2Q16206 610 aaKnown RBP17.41■□□□□ 0.38
GPC1-207ENST00000466624 SLC10A6Q3KNW5 377 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 SEZ6Q53EL9 994 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 NOMO2Q5JPE7 1267 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 ZBTB41Q5SVQ8 909 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 ANKRD40Q6AI12 368 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 FAM109BQ6ICB4 259 aaPredicted RBP17.41■□□□□ 0.38
GPC1-207ENST00000466624 BRSK2Q8IWQ3 736 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 LRRC43Q8N309 656 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 GSTCDQ8NEC7 633 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 RPS6KC1Q96S38 1066 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 GAD1Q99259 594 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 FAM213AQ9BRX8 229 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 ASB7Q9H672 318 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 RWDD2AQ9UIY3 292 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 CTNND2Q9UQB3 1225 aa17.41■□□□□ 0.38
GPC1-207ENST00000466624 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms