RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 ADAM28Q9UKQ2 775 aa18.31■□□□□ 0.52
SDHB-203ENST00000466613 TNFSF13BQ9Y275 285 aa18.31■□□□□ 0.52
SDHB-203ENST00000466613 RBM19Q9Y4C8 960 aaKnown RBP18.31■□□□□ 0.52
SDHB-203ENST00000466613 CITO14578 2027 aa18.31■□□□□ 0.52
SDHB-203ENST00000466613 C2orf16Q68DN1 1984 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 MTCL1Q9Y4B5 1905 aaKnown RBP18.3■□□□□ 0.52
SDHB-203ENST00000466613 C2CD2LO14523 706 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 THP07101 528 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 PLA2G4BP0C869 781 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 UBA7P41226 1012 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 CLCN4P51793 760 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 DSG1Q02413 1049 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 RAD51AP2Q09MP3 1159 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 HSP90AA2PQ14568 343 aaPredicted RBP18.3■□□□□ 0.52
SDHB-203ENST00000466613 SF3A1Q15459 793 aaKnown RBP18.3■□□□□ 0.52
SDHB-203ENST00000466613 RARS2Q5T160 578 aaKnown RBP18.3■□□□□ 0.52
SDHB-203ENST00000466613 KIAA0319Q5VV43 1072 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 FUT10Q6P4F1 479 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 TAS1R3Q7RTX0 852 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 ACO2Q99798 780 aaKnown RBP18.3■□□□□ 0.52
SDHB-203ENST00000466613 MRPL4Q9BYD3 311 aaKnown RBP18.3■□□□□ 0.52
SDHB-203ENST00000466613 CHST7Q9NS84 486 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 KCNG1Q9UIX4 513 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 CDH22Q9UJ99 828 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 GDAQ9Y2T3 454 aa18.3■□□□□ 0.52
SDHB-203ENST00000466613 CASTOR2A6NHX0 329 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 SFI1A8K8P3 1242 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 PRR33A8MZF0 331 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 LONP1P36776 959 aaKnown RBP18.29■□□□□ 0.52
SDHB-203ENST00000466613 MTHFRP42898 656 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 NAB2Q15742 525 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 C12orf76Q8N812 135 aaPredicted RBP18.29■□□□□ 0.52
SDHB-203ENST00000466613 SPIRE2Q8WWL2 714 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 CALML4Q96GE6 196 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 INTS4Q96HW7 963 aaKnown RBP18.29■□□□□ 0.52
SDHB-203ENST00000466613 FBXL18Q96ME1 805 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 RIPOR3Q96MK2 946 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 PAAF1Q9BRP4 392 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 NTPCRQ9BSD7 190 aaKnown RBP18.29■□□□□ 0.52
SDHB-203ENST00000466613 GPR62Q9BZJ7 368 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 CXCL16Q9H2A7 254 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 SFXN1Q9H9B4 322 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 RXFP1Q9HBX9 757 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 PTPRHQ9HD43 1115 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 CACNG4Q9UBN1 327 aa18.29■□□□□ 0.52
SDHB-203ENST00000466613 VWA8A3KMH1 1905 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 MYH15Q9Y2K3 1946 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 SLC16A4O15374 487 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 TEX28O15482 410 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 TADA2AO75478 443 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 ADH1AP07327 375 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 PLS3P13797 630 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 SYT1P21579 422 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 GRIN1Q05586 938 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 USP41Q3LFD5 358 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 ZNF568Q3ZCX4 644 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 KIAA1841Q6NSI8 718 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 GPR65Q8IYL9 337 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 RABGGTAQ92696 567 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 CDT1Q9H211 546 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 POMKQ9H5K3 350 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 RAPGEFL1Q9UHV5 662 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 NR2E1Q9Y466 385 aa18.28■□□□□ 0.52
SDHB-203ENST00000466613 PDCD11Q14690 1871 aaKnown RBP18.28■□□□□ 0.52
SDHB-203ENST00000466613 SF3B1O75533 1304 aaKnown RBP eCLIP18.27■□□□□ 0.529e-7■■■■■ 57.4
SDHB-203ENST00000466613 K7ELQ4 463 aaPredicted RBP18.27■□□□□ 0.52
SDHB-203ENST00000466613 KIF4AO95239 1232 aa18.27■□□□□ 0.52
SDHB-203ENST00000466613 PROZP22891 400 aa18.27■□□□□ 0.52
SDHB-203ENST00000466613 GRM5P41594 1212 aa18.27■□□□□ 0.52
SDHB-203ENST00000466613 SMTNP53814 917 aa18.27■□□□□ 0.52
SDHB-203ENST00000466613 RESTQ13127 1097 aa18.27■□□□□ 0.52
SDHB-203ENST00000466613 ATAT1Q5SQI0 421 aa18.27■□□□□ 0.52
SDHB-203ENST00000466613 KANK3Q6NY19 840 aa18.27■□□□□ 0.52
SDHB-203ENST00000466613 CEP120Q8N960 986 aa18.27■□□□□ 0.52
SDHB-203ENST00000466613 B3GALT6Q96L58 329 aa18.27■□□□□ 0.52
SDHB-203ENST00000466613 TARS2Q9BW92 718 aaKnown RBP18.27■□□□□ 0.52
SDHB-203ENST00000466613 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.27■□□□□ 0.52
SDHB-203ENST00000466613 NPHP3-ACAD11A0A0J9YXS1 232 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 SPDYE4A6NLX3 237 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 WEE2P0C1S8 567 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 SP100P23497 879 aaPredicted RBP18.26■□□□□ 0.51
SDHB-203ENST00000466613 STRN3Q13033 797 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 KARSQ15046 597 aaKnown RBP18.26■□□□□ 0.51
SDHB-203ENST00000466613 ARSHQ5FYA8 562 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 GLRA4Q5JXX5 417 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 MPZL3Q6UWV2 235 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 TMC5Q6UXY8 1006 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 TMEM161BQ8NDZ6 487 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 RASSF8Q8NHQ8 419 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 LRRC15Q8TF66 581 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 HASPINQ8TF76 798 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 PPP1R10Q96QC0 940 aaKnown RBP18.26■□□□□ 0.51
SDHB-203ENST00000466613 CCDC94Q9BW85 323 aaPredicted RBP18.26■□□□□ 0.51
SDHB-203ENST00000466613 MAN1C1Q9NR34 630 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 TOPORSQ9NS56 1045 aaPredicted RBP18.26■□□□□ 0.51
SDHB-203ENST00000466613 BLOC1S4Q9NUP1 217 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 LARSQ9P2J5 1176 aaKnown RBP18.26■□□□□ 0.51
SDHB-203ENST00000466613 DPP7Q9UHL4 492 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 ODF2LQ9ULJ1 636 aa18.26■□□□□ 0.51
SDHB-203ENST00000466613 CLIC4Q9Y696 253 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms