RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ACSF2Q96CM8 615 aaPredicted RBP22.8■■□□□ 1.24
COL6A1-203ENST00000466285 TUFT1Q9NNX1 390 aa22.8■■□□□ 1.24
COL6A1-203ENST00000466285 OR52Z1P0C646 297 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 LIG1P18858 919 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 GBP2P32456 591 aaPredicted RBP22.79■■□□□ 1.24
COL6A1-203ENST00000466285 TRIM29Q14134 588 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 HSP90AA2PQ14568 343 aaPredicted RBP22.79■■□□□ 1.24
COL6A1-203ENST00000466285 LILRA6Q6PI73 481 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 PADI6Q6TGC4 694 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 SIX5Q8N196 739 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 COLEC11Q9BWP8 271 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 MFSD1Q9H3U5 465 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 PPP4R2Q9NY27 417 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 STK39Q9UEW8 545 aa22.79■■□□□ 1.24
COL6A1-203ENST00000466285 ZMYM2Q9UBW7 1377 aa22.78■■□□□ 1.24
COL6A1-203ENST00000466285 KRBA1A5PL33 1030 aa22.78■■□□□ 1.24
COL6A1-203ENST00000466285 PAPLNO95428 1278 aa22.78■■□□□ 1.24
COL6A1-203ENST00000466285 NEFLP07196 543 aa22.78■■□□□ 1.24
COL6A1-203ENST00000466285 CFHP08603 1231 aa22.78■■□□□ 1.24
COL6A1-203ENST00000466285 NTHL1P78549 312 aa22.78■■□□□ 1.24
COL6A1-203ENST00000466285 GET4Q7L5D6 327 aaPredicted RBP22.78■■□□□ 1.24
COL6A1-203ENST00000466285 POLR3CQ9BUI4 534 aaPredicted RBP22.78■■□□□ 1.24
COL6A1-203ENST00000466285 NT5C3AQ9H0P0 336 aa22.78■■□□□ 1.24
COL6A1-203ENST00000466285 PRMT7Q9NVM4 692 aaPredicted RBP22.78■■□□□ 1.24
COL6A1-203ENST00000466285 PRKCBP05771 671 aa22.77■■□□□ 1.24
COL6A1-203ENST00000466285 NCBP1Q09161 790 aaKnown RBP22.77■■□□□ 1.24
COL6A1-203ENST00000466285 TUSC3Q13454 348 aa22.77■■□□□ 1.24
COL6A1-203ENST00000466285 FAM187BQ17R55 369 aa22.77■■□□□ 1.24
COL6A1-203ENST00000466285 USP41Q3LFD5 358 aa22.77■■□□□ 1.24
COL6A1-203ENST00000466285 GLRA4Q5JXX5 417 aa22.77■■□□□ 1.24
COL6A1-203ENST00000466285 MCPH1Q8NEM0 835 aa22.77■■□□□ 1.24
COL6A1-203ENST00000466285 PDCD11Q14690 1871 aaKnown RBP22.77■■□□□ 1.24
COL6A1-203ENST00000466285 XRCC6P12956 609 aaKnown RBP eCLIP22.76■■□□□ 1.23
COL6A1-203ENST00000466285 AOC1P19801 751 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 TTC38Q5R3I4 469 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 NT5DC1Q5TFE4 455 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 FRMD5Q7Z6J6 570 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 HACE1Q8IYU2 909 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 C4orf32Q8N8J7 132 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 CEP120Q8N960 986 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 C8orf76Q96K31 380 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 PRIMPOLQ96LW4 560 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 CLSTN3Q9BQT9 956 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 FNIP2Q9P278 1114 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 EPS15L1Q9UBC2 864 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 SSX2IPQ9Y2D8 614 aa22.76■■□□□ 1.23
COL6A1-203ENST00000466285 PP2D1A8MPX8 630 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 CYP11B2P19099 503 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 RPA1P27694 616 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 PRPF4BQ13523 1007 aaKnown RBP22.75■■□□□ 1.23
COL6A1-203ENST00000466285 ZBTB8OSQ8IWT0 167 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 LNX1Q8TBB1 728 aaPredicted RBP22.75■■□□□ 1.23
COL6A1-203ENST00000466285 NACC1Q96RE7 527 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 KIF2CQ99661 725 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 RPP25Q9BUL9 199 aaKnown RBP22.75■■□□□ 1.23
COL6A1-203ENST00000466285 RHOBTB2Q9BYZ6 727 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 GOLGA2P5Q9HBQ8 144 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 FBXW11Q9UKB1 542 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 CA14Q9ULX7 337 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 GDAQ9Y2T3 454 aa22.75■■□□□ 1.23
COL6A1-203ENST00000466285 SF3B1O75533 1304 aaKnown RBP eCLIP22.75■■□□□ 1.23
COL6A1-203ENST00000466285 SPTBN4Q9H254 2564 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 ARHGEF35A5YM69 484 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 PRR23AA6NEV1 266 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 PROB1E7EW31 1015 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 N4BP3O15049 544 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 ST18O60284 1047 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 TADA2AO75478 443 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 NBL1P41271 181 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 CLCN5P51795 746 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 FAM171A1Q5VUB5 890 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 CD300LGQ6UXG3 332 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 RSPO2Q6UXX9 243 aaPredicted RBP22.74■■□□□ 1.23
COL6A1-203ENST00000466285 TMEM130Q8N3G9 435 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 C3orf58Q8NDZ4 430 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 PRKD2Q9BZL6 878 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 FBXL21Q9UKT6 434 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 DCHS1Q96JQ0 3298 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 RIF1Q5UIP0 2472 aaKnown RBP22.74■■□□□ 1.23
COL6A1-203ENST00000466285 FAM186AA6NE01 2351 aa22.74■■□□□ 1.23
COL6A1-203ENST00000466285 I3L4J1 428 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 NR1I2O75469 434 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 ZMYND10O75800 440 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 NAMPTP43490 491 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 TOB1P50616 345 aaPredicted RBP22.73■■□□□ 1.23
COL6A1-203ENST00000466285 HTR4Q13639 388 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 PSMD5Q16401 504 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 CEP57Q86XR8 500 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 CCDC105Q8IYK2 499 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 DAW1Q8N136 415 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 SLC44A3Q8N4M1 653 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 GPR152Q8TDT2 470 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 PIK3R5Q8WYR1 880 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 BHMT2Q9H2M3 363 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 PIDD1Q9HB75 910 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.73■■□□□ 1.23
COL6A1-203ENST00000466285 ZDHHC7Q9NXF8 308 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 IGSF9Q9P2J2 1179 aa22.73■■□□□ 1.23
COL6A1-203ENST00000466285 WDR87Q6ZQQ6 2873 aa22.72■■□□□ 1.23
COL6A1-203ENST00000466285 CITO14578 2027 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms