RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 HID1Q8IV36 788 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 RPAP2Q8IXW5 612 aaPredicted RBP6.92□□□□□ -1.3
NCL-208ENST00000466274 MFSD2AQ8NA29 543 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 MICAL1Q8TDZ2 1067 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 SCFD2Q8WU76 684 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 NECTIN4Q96NY8 510 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 NUP88Q99567 741 aaPredicted RBP6.92□□□□□ -1.3
NCL-208ENST00000466274 CYP39A1Q9NYL5 469 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 NCDNQ9UBB6 729 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 ANGPTL2Q9UKU9 493 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 CAPN6Q9Y6Q1 641 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 R4GN57 208 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 MYH13Q9UKX3 1938 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 ANKRD11Q6UB99 2663 aaPredicted RBP6.91□□□□□ -1.3
NCL-208ENST00000466274 NDUFB10O96000 172 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 HOXB8P17481 243 aaPredicted RBP6.91□□□□□ -1.3
NCL-208ENST00000466274 THPOP40225 353 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 RAP1GAPP47736 663 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 BTG3Q14201 252 aaPredicted RBP6.91□□□□□ -1.3
NCL-208ENST00000466274 TMEM63BQ5T3F8 832 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 CES5AQ6NT32 575 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 MPZL3Q6UWV2 235 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 CILP2Q8IUL8 1156 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 DHX37Q8IY37 1157 aaKnown RBP6.91□□□□□ -1.3
NCL-208ENST00000466274 PPP1R13LQ8WUF5 828 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 CHURC1Q8WUH1 139 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 UBE2FQ969M7 185 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 DYNLL2Q96FJ2 89 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 CTAGE1Q96RT6 745 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 RIOK1Q9BRS2 568 aaKnown RBP6.91□□□□□ -1.3
NCL-208ENST00000466274 DCP1AQ9NPI6 582 aaPredicted RBP6.91□□□□□ -1.3
NCL-208ENST00000466274 GPR108Q9NPR9 543 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 IGSF5Q9NSI5 407 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 ATP8A2Q9NTI2 1148 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 ZSWIM5Q9P217 1185 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 NYAP2Q9P242 653 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 FBXL21Q9UKT6 434 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 SYNPO2Q9UMS6 1093 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 PCDHB5Q9Y5E4 795 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 KMT2EQ8IZD2 1858 aa6.91□□□□□ -1.3
NCL-208ENST00000466274 SIPA1L1O43166 1804 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 ZNF292O60281 2723 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 CAND2O75155 1236 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 CST3P01034 146 aaPredicted RBP6.9□□□□□ -1.3
NCL-208ENST00000466274 GNAI3P08754 354 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 TXNP10599 105 aaKnown RBP6.9□□□□□ -1.3
NCL-208ENST00000466274 ALAS1P13196 640 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 SP100P23497 879 aaPredicted RBP6.9□□□□□ -1.3
NCL-208ENST00000466274 GDNFP39905 211 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 IKQ13123 557 aaPredicted RBP6.9□□□□□ -1.3
NCL-208ENST00000466274 SEPT6Q14141 434 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 TTF1Q15361 905 aaPredicted RBP6.9□□□□□ -1.3
NCL-208ENST00000466274 DGKDQ16760 1214 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 CWF19L1Q69YN2 538 aaKnown RBP6.9□□□□□ -1.3
NCL-208ENST00000466274 NSMFQ6X4W1 530 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 SYDE1Q6ZW31 735 aaPredicted RBP6.9□□□□□ -1.3
NCL-208ENST00000466274 CDH24Q86UP0 819 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 FAM160B2Q86V87 743 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 DCLK2Q8N568 766 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 ATP8B4Q8TF62 1192 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 DDX1Q92499 740 aaKnown RBP6.9□□□□□ -1.3
NCL-208ENST00000466274 HDAC6Q9UBN7 1215 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 ISY1Q9ULR0 285 aaKnown RBP6.9□□□□□ -1.3
NCL-208ENST00000466274 ADGRA3Q8IWK6 1321 aa6.9□□□□□ -1.3
NCL-208ENST00000466274 EP300Q09472 2414 aaPredicted RBP6.9□□□□□ -1.31
NCL-208ENST00000466274 DMXL1Q9Y485 3027 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 GFRA2O00451 464 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 PI15O43692 258 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 GLP2RO95838 553 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 MMP3P08254 477 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 CYP2D6P10635 497 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 TECP42680 631 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 ALDH5A1P51649 535 aaPredicted RBP6.89□□□□□ -1.31
NCL-208ENST00000466274 STAT2P52630 851 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 UBE3AQ05086 875 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 TRIM71Q2Q1W2 868 aaKnown RBP6.89□□□□□ -1.31
NCL-208ENST00000466274 ANKRD54Q6NXT1 300 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 TMEM184AQ6ZMB5 413 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 RUFY4Q6ZNE9 571 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 C16orf86Q6ZW13 317 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 ADGRD2Q7Z7M1 963 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 ZDHHC14Q8IZN3 488 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 TDRD5Q8NAT2 981 aaKnown RBP6.89□□□□□ -1.31
NCL-208ENST00000466274 BHLHE22Q8NFJ8 381 aaPredicted RBP6.89□□□□□ -1.31
NCL-208ENST00000466274 SPPL3Q8TCT6 385 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 POF1BQ8WVV4 589 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 S1PR5Q9H228 398 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 KCNK12Q9HB15 430 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 RNF19AQ9NV58 838 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 CLIP2Q9UDT6 1046 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 VPS13AQ96RL7 3174 aa6.89□□□□□ -1.31
NCL-208ENST00000466274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.88□□□□□ -1.31
NCL-208ENST00000466274 WASH4PA8MWX3 477 aa6.88□□□□□ -1.31
NCL-208ENST00000466274 PER2O15055 1255 aa6.88□□□□□ -1.31
NCL-208ENST00000466274 GH1P01241 217 aa6.88□□□□□ -1.31
NCL-208ENST00000466274 ITGB1P05556 798 aa6.88□□□□□ -1.31
NCL-208ENST00000466274 PROS1P07225 676 aa6.88□□□□□ -1.31
NCL-208ENST00000466274 LINC00271P0C7V0 271 aa6.88□□□□□ -1.31
NCL-208ENST00000466274 SP9P0CG40 484 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms