RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 ATG4AQ8WYN0 398 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 IFT74Q96LB3 600 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 TEPSINQ96N21 525 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 CCT8L2Q96SF2 557 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 POLR3FQ9H1D9 316 aaPredicted RBP17.55■□□□□ 0.4
SLX4-202ENST00000466154 PIM2Q9P1W9 311 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 NOCTQ9UK39 431 aaKnown RBP17.55■□□□□ 0.4
SLX4-202ENST00000466154 PNMA2Q9UL42 364 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 SYNGAP1Q96PV0 1343 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 CAND2O75155 1236 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 RFX1P22670 979 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 POLGP54098 1239 aaPredicted RBP17.55■□□□□ 0.4
SLX4-202ENST00000466154 IFT88Q13099 833 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 PTGISQ16647 500 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 SLC39A4Q6P5W5 647 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 FAM71AQ8IYT1 594 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 ZDHHC14Q8IZN3 488 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 ZBTB45Q96K62 511 aaPredicted RBP17.55■□□□□ 0.4
SLX4-202ENST00000466154 CAMKK2Q96RR4 588 aa17.55■□□□□ 0.4
SLX4-202ENST00000466154 H0YGN5 161 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 CTNND1O60716 968 aaKnown RBP17.54■□□□□ 0.4
SLX4-202ENST00000466154 MAPK4P31152 587 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 RPL21P46778 160 aaKnown RBP17.54■□□□□ 0.4
SLX4-202ENST00000466154 NCKAP1LP55160 1127 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 DENND2CQ68D51 928 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 NLRP14Q86W24 1093 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 ZNF473Q8WTR7 871 aaKnown RBP17.54■□□□□ 0.4
SLX4-202ENST00000466154 CCDC114Q96M63 670 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 EPN3Q9H201 632 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 CNOT7Q9UIV1 285 aaKnown RBP17.54■□□□□ 0.4
SLX4-202ENST00000466154 NFS1Q9Y697 457 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 SFNP31947 248 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 MAGEA9P43362 315 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 PMS2P54278 862 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 CCDC38Q502W7 563 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 DLK2Q6UY11 383 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 OTUD6BQ8N6M0 293 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 KIFAP3Q92845 792 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 ATP6V0A1Q93050 837 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 TMEM8AQ9HCN3 771 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 JPH1Q9HDC5 661 aaPredicted RBP17.54■□□□□ 0.4
SLX4-202ENST00000466154 C1orf112Q9NSG2 853 aa17.54■□□□□ 0.4
SLX4-202ENST00000466154 COL2A1P02458 1487 aaPredicted RBP17.53■□□□□ 0.4
SLX4-202ENST00000466154 PFASO15067 1338 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
SLX4-202ENST00000466154 SLC29A2Q14542 456 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 SEMA4AQ9H3S1 761 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 ASIC3Q9UHC3 531 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 PGAP2Q9UHJ9 254 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 MTUS1Q9ULD2 1270 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 PHF2O75151 1096 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 GJB6O95452 261 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 PIK3CAP42336 1068 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 CYP24A1Q07973 514 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 MYBPC2Q14324 1141 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 TTC31Q49AM3 519 aaPredicted RBP17.53■□□□□ 0.4
SLX4-202ENST00000466154 NIPA1Q7RTP0 329 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 MAP4K3Q8IVH8 894 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 CD302Q8IX05 232 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 ARFGAP2Q8N6H7 521 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 HELQQ8TDG4 1101 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 MIF4GDA9UHW6 222 aaKnown RBP17.53■□□□□ 0.4
SLX4-202ENST00000466154 POU5F1Q01860 360 aaKnown RBP17.53■□□□□ 0.4
SLX4-202ENST00000466154 CHADLQ6NUI6 762 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 TAX1BP1Q86VP1 789 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 GPD1LQ8N335 351 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 SHC3Q92529 594 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 KLHL11Q9NVR0 708 aa17.53■□□□□ 0.4
SLX4-202ENST00000466154 RARAP10276 462 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 ACTR2P61160 394 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 PPP2R2AP63151 447 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 DALRD3Q5D0E6 543 aaKnown RBP17.52■□□□□ 0.4
SLX4-202ENST00000466154 WDR44Q5JSH3 913 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 DUPD1Q68J44 220 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 VSIG10LQ86VR7 867 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 MYCBPAPQ8TBZ2 947 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 AZI2Q9H6S1 392 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 SLC9A2Q9UBY0 812 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 ATAD5Q96QE3 1844 aa17.52■□□□□ 0.4
SLX4-202ENST00000466154 P4HA2O15460 535 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 ACSL3O95573 720 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 PSAPP07602 524 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 MAPTP10636 758 aaKnown RBP17.52■□□□□ 0.39
SLX4-202ENST00000466154 BACE1P56817 501 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 CDR2Q01850 454 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 FSTL1Q12841 308 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 ZNF394Q53GI3 561 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 ANGEL2Q5VTE6 544 aaKnown RBP17.52■□□□□ 0.39
SLX4-202ENST00000466154 LRIG3Q6UXM1 1119 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 PACS2Q86VP3 889 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 NSUN6Q8TEA1 469 aaKnown RBP17.52■□□□□ 0.39
SLX4-202ENST00000466154 C11orf70Q9BRQ4 267 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 TCHPQ9BT92 498 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 ANKEF1Q9NU02 776 aa17.52■□□□□ 0.39
SLX4-202ENST00000466154 KIAA0391O15091 583 aaKnown RBP17.51■□□□□ 0.39
SLX4-202ENST00000466154 SCP2P22307 547 aa17.51■□□□□ 0.39
SLX4-202ENST00000466154 RRM1P23921 792 aa17.51■□□□□ 0.39
SLX4-202ENST00000466154 RWDD2BP57060 319 aa17.51■□□□□ 0.39
SLX4-202ENST00000466154 NLRP11P59045 1033 aaKnown RBP17.51■□□□□ 0.39
SLX4-202ENST00000466154 STRN3Q13033 797 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms