RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MRPL10Q7Z7H8 261 aaKnown RBP12.15□□□□□ -0.46
VCP-204ENST00000466100 LUZP1Q86V48 1076 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 CBWD2Q8IUF1 395 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 CRIPAKQ8N1N5 446 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 GPD1LQ8N335 351 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 DPF3Q92784 378 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 TCHPQ9BT92 498 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 MKNK1Q9BUB5 465 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 SRRTQ9BXP5 876 aaKnown RBP12.15□□□□□ -0.46
VCP-204ENST00000466100 THAP9Q9H5L6 903 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 IPPQ9Y573 584 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 PCDHB2Q9Y5E7 798 aa12.15□□□□□ -0.46
VCP-204ENST00000466100 GBF1Q92538 1859 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 KIAA1671Q9BY89 1806 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 MEIS3P2A8K0S8 358 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 ENPP3O14638 875 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 EXOC3O60645 756 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 LDHAP00338 332 aaKnown RBP12.14□□□□□ -0.47
VCP-204ENST00000466100 STAG3L1P0CL83 205 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 MATR3P43243 847 aaKnown RBP eCLIP12.14□□□□□ -0.47
VCP-204ENST00000466100 ACOT2P49753 483 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 POU5F1Q01860 360 aaKnown RBP12.14□□□□□ -0.47
VCP-204ENST00000466100 ENOX2Q16206 610 aaKnown RBP12.14□□□□□ -0.47
VCP-204ENST00000466100 SNRNP35Q16560 246 aaKnown RBP12.14□□□□□ -0.47
VCP-204ENST00000466100 SEZ6Q53EL9 994 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 SLC24A5Q71RS6 500 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 APBB1IPQ7Z5R6 666 aaPredicted RBP12.14□□□□□ -0.47
VCP-204ENST00000466100 ECHDC2Q86YB7 292 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 BRSK2Q8IWQ3 736 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 THNSL1Q8IYQ7 743 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 RPUSD2Q8IZ73 545 aaKnown RBP12.14□□□□□ -0.47
VCP-204ENST00000466100 PLEKHO2Q8TD55 490 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 NOC3LQ8WTT2 800 aaKnown RBP12.14□□□□□ -0.47
VCP-204ENST00000466100 MFSD14AQ96MC6 490 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 FAM213AQ9BRX8 229 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 RBSNQ9H1K0 784 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 RNF39Q9H2S5 420 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 KIAA1586Q9HCI6 787 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 C1orf112Q9NSG2 853 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 SAMSN1Q9NSI8 373 aaKnown RBP12.14□□□□□ -0.47
VCP-204ENST00000466100 FANCLQ9NW38 375 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 HES2Q9Y543 173 aa12.14□□□□□ -0.47
VCP-204ENST00000466100 RECQL4O94761 1208 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 CLTAP09496 248 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 CXCL8P10145 99 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 ACRP10323 421 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 CYP24A1Q07973 514 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 KYAT1Q16773 422 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 SLC10A6Q3KNW5 377 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 XKR4Q5GH76 650 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 TMEM240Q5SV17 173 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 C1orf220Q5T0J3 134 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 CEP135Q66GS9 1140 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 AGMOQ6ZNB7 445 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
VCP-204ENST00000466100 FAM186BQ8IYM0 893 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 CNOT6LQ96LI5 555 aaKnown RBP12.13□□□□□ -0.47
VCP-204ENST00000466100 TRIM6Q9C030 488 aaPredicted RBP12.13□□□□□ -0.47
VCP-204ENST00000466100 RNF19AQ9NV58 838 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 SNTG2Q9NY99 539 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 NR2E3Q9Y5X4 410 aa12.13□□□□□ -0.47
VCP-204ENST00000466100 SCN1AP35498 2009 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 ABHD14A-ACY1A0A1B0GW23 586 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 TTC26A0AVF1 554 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 ZNF233A6NK53 670 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 SMTNL1A8MU46 457 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 INPPL1O15357 1258 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 EFCAB14O75071 495 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 BAIAP3O94812 1187 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 FGFR1OPO95684 399 aaKnown RBP12.12□□□□□ -0.47
VCP-204ENST00000466100 EPB41P11171 864 aaKnown RBP12.12□□□□□ -0.47
VCP-204ENST00000466100 SKIP12755 728 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 ATP1A3P13637 1013 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 PSMC2P35998 433 aaKnown RBP12.12□□□□□ -0.47
VCP-204ENST00000466100 OSTNP61366 133 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 WDR5P61964 334 aaKnown RBP12.12□□□□□ -0.47
VCP-204ENST00000466100 ENPEPQ07075 957 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 IKBKEQ14164 716 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 PSMD6Q15008 389 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 ALKAL1Q6UXT8 129 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
VCP-204ENST00000466100 FRMD5Q7Z6J6 570 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 TRIM59Q8IWR1 403 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 RNF214Q8ND24 703 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 LPPQ93052 612 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 SNX27Q96L92 541 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.472e-12■□□□□ 10.1
VCP-204ENST00000466100 CCDC94Q9BW85 323 aaPredicted RBP12.12□□□□□ -0.47
VCP-204ENST00000466100 CXCL16Q9H2A7 254 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 ELAC1Q9H777 363 aaKnown RBP12.12□□□□□ -0.47
VCP-204ENST00000466100 TMEM161AQ9NX61 479 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 RBAKQ9NYW8 714 aaPredicted RBP12.12□□□□□ -0.47
VCP-204ENST00000466100 FRMD4BQ9Y2L6 1034 aa12.12□□□□□ -0.47
VCP-204ENST00000466100 PTPRJQ12913 1337 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 BECN2A8MW95 431 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 KCNJ18B7U540 433 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 GNA14O95837 355 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 EOMESO95936 686 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 ITGA4P13612 1032 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms