RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 GLUD2P49448 558 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 USP41Q3LFD5 358 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 UNC13DQ70J99 1090 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 ZBTB33Q86T24 672 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 EPSTI1Q96J88 318 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 ACO2Q99798 780 aaKnown RBP11.75□□□□□ -0.53
NPHP3-203ENST00000465756 TARS2Q9BW92 718 aaKnown RBP11.75□□□□□ -0.53
NPHP3-203ENST00000465756 PDZD7Q9H5P4 517 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 POLR2DO15514 142 aaKnown RBP11.75□□□□□ -0.53
NPHP3-203ENST00000465756 CSDE1O75534 798 aaKnown RBP11.75□□□□□ -0.53
NPHP3-203ENST00000465756 RECQL4O94761 1208 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 ELF1P32519 619 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 ARMCX5Q6P1M9 558 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 FAM173BQ6P4H8 233 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 SFR1Q86XK3 245 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 CCDC150Q8NCX0 1101 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 KCNN1Q92952 543 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 TRIM44Q96DX7 344 aaPredicted RBP11.75□□□□□ -0.53
NPHP3-203ENST00000465756 RIPOR3Q96MK2 946 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 CLIC6Q96NY7 704 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 NECTIN4Q96NY8 510 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 PANK2Q9BZ23 570 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 DERAQ9Y315 318 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 MTCH2Q9Y6C9 303 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 MYO9BQ13459 2157 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 A0A087WWV3 80 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 C1RP00736 705 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 TNNC2P02585 160 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 SLFN14P0C7P3 912 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 CCDC85BQ15834 202 aaPredicted RBP11.75□□□□□ -0.53
NPHP3-203ENST00000465756 TJAP1Q5JTD0 557 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 LIN9Q5TKA1 542 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 RESP18Q5W5W9 173 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 DCLRE1AQ6PJP8 1040 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 CYP26C1Q6V0L0 522 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 NOC3LQ8WTT2 800 aaKnown RBP11.75□□□□□ -0.53
NPHP3-203ENST00000465756 HERC2P3Q9BVR0 1158 aa11.75□□□□□ -0.53
NPHP3-203ENST00000465756 CALUO43852 315 aaPredicted RBP11.74□□□□□ -0.53
NPHP3-203ENST00000465756 CXCL14O95715 111 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 PTMSP20962 102 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 GARTP22102 1010 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 MLH1P40692 756 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 ZNF131P52739 623 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 TCF25Q9BQ70 676 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 ASB7Q9H672 318 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 PCDHA7Q9UN72 937 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 PRG3Q9Y2Y8 225 aaPredicted RBP11.74□□□□□ -0.53
NPHP3-203ENST00000465756 LCHNA4D1U4 455 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 INPPL1O15357 1258 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 IGSF21Q96ID5 467 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 FNBP1Q96RU3 617 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 C7orf25Q9BPX7 421 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 CLDND1Q9NY35 253 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 TET1Q8NFU7 2136 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.74□□□□□ -0.53
NPHP3-203ENST00000465756 POMCP01189 267 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 PIGRP01833 764 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 PNPLA4P41247 253 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 MTHFRP42898 656 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 SCNN1GP51170 649 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 SPECC1Q5M775 1068 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 MAP4K3Q8IVH8 894 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.74□□□□□ -0.53
NPHP3-203ENST00000465756 TMEM161BQ8NDZ6 487 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 LPPQ93052 612 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 PABPC5Q96DU9 382 aaKnown RBP11.74□□□□□ -0.53
NPHP3-203ENST00000465756 FAM212AQ96EL1 285 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 CDT1Q9H211 546 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 SNTG2Q9NY99 539 aa11.74□□□□□ -0.53
NPHP3-203ENST00000465756 AGO2Q9UKV8 859 aaKnown RBP11.74□□□□□ -0.53
NPHP3-203ENST00000465756 FGFR1OPO95684 399 aaKnown RBP11.73□□□□□ -0.53
NPHP3-203ENST00000465756 IL17AQ16552 155 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 SPPL3Q8TCT6 385 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 CCDC113Q9H0I3 377 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 NRDE2Q9H7Z3 1164 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 BLOC1S4Q9NUP1 217 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 DSEQ9UL01 958 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 ARL5CA6NH57 179 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 CYP3A5P20815 502 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 AP3M2P53677 418 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 GTF2BQ00403 316 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 PLPP4Q5VZY2 271 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 RTL10Q7L3V2 364 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 STAMQ92783 540 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 ANKRD36BP1Q96IX9 119 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 UBE2ZQ9H832 354 aaPredicted RBP11.73□□□□□ -0.53
NPHP3-203ENST00000465756 CD207Q9UJ71 328 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 GALTP07902 379 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 KRT13P13646 458 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 KLRC2P26717 231 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 CLLU1OSQ5K130 101 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 ELMOD1Q8N336 334 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 HDAC7Q8WUI4 952 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 MINDY3Q9H8M7 445 aa11.73□□□□□ -0.53
NPHP3-203ENST00000465756 SFI1A8K8P3 1242 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 ITGB1P05556 798 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 HOXA11P31270 313 aaPredicted RBP11.72□□□□□ -0.53
NPHP3-203ENST00000465756 UBXN11Q5T124 520 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms