RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 NT5C3AQ9H0P0 336 aa15.72■□□□□ 0.11
ATG4B-214ENST00000465399 TUFT1Q9NNX1 390 aa15.72■□□□□ 0.11
ATG4B-214ENST00000465399 GPRC5CQ9NQ84 441 aa15.72■□□□□ 0.11
ATG4B-214ENST00000465399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.72■□□□□ 0.118e-14■□□□□ 9.8
ATG4B-214ENST00000465399 WNT16Q9UBV4 365 aa15.72■□□□□ 0.11
ATG4B-214ENST00000465399 MIA3Q5JRA6 1907 aa15.72■□□□□ 0.11
ATG4B-214ENST00000465399 FAM186AA6NE01 2351 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 PTPRZ1P23471 2315 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-214ENST00000465399 A0A087WWV3 80 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 STK25O00506 426 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 WNT7AO00755 349 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 N4BP3O15049 544 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 PI15O43692 258 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 PAPLNO95428 1278 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 RPL17P18621 184 aaKnown RBP15.71■□□□□ 0.11
ATG4B-214ENST00000465399 TUSC3Q13454 348 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 SAFBQ15424 915 aaKnown RBP eCLIP15.71■□□□□ 0.11
ATG4B-214ENST00000465399 CDCA2Q69YH5 1023 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-214ENST00000465399 GET4Q7L5D6 327 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-214ENST00000465399 FRMD5Q7Z6J6 570 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 ERMNQ8TAM6 284 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 RSAD2Q8WXG1 361 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 ZNF707Q96C28 371 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-214ENST00000465399 MYADMQ96S97 322 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 ADPGKQ9BRR6 497 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 PRKD2Q9BZL6 878 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 C2orf40Q9H1Z8 148 aa15.71■□□□□ 0.11
ATG4B-214ENST00000465399 RIF1Q5UIP0 2472 aaKnown RBP15.7■□□□□ 0.1
ATG4B-214ENST00000465399 JAK2O60674 1132 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 NEFLP07196 543 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 SPATA31C1P0DKV0 1188 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 SRFP11831 508 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 MCM7P33993 719 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 PRPF4BQ13523 1007 aaKnown RBP15.7■□□□□ 0.1
ATG4B-214ENST00000465399 ANGPT1Q15389 498 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 FAM187BQ17R55 369 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 RTP2Q5QGT7 225 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 LILRA6Q6PI73 481 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 CATSPER3Q86XQ3 398 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 SLC44A3Q8N4M1 653 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 DTWD2Q8NBA8 298 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 NACC1Q96RE7 527 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 FZD8Q9H461 694 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 CACNG4Q9UBN1 327 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 CA14Q9ULX7 337 aa15.7■□□□□ 0.1
ATG4B-214ENST00000465399 CASTOR2A6NHX0 329 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 MED24O75448 989 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 ZMYND10O75800 440 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 KIF4AO95239 1232 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 THP07101 528 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 LAMP2P13473 410 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 NEK4P51957 841 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 MAPK6Q16659 721 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 LIN9Q5TKA1 542 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 POTEGQ6S5H5 508 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 PRSS55Q6UWB4 352 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-214ENST00000465399 CEP57Q86XR8 500 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 HASPINQ8TF76 798 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 SNX27Q96L92 541 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 PAAF1Q9BRP4 392 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 TTPALQ9BTX7 342 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 POLR3CQ9BUI4 534 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-214ENST00000465399 TMEM60Q9H2L4 133 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 PDZD7Q9H5P4 517 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 SNTG2Q9NY99 539 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 VPS13AQ96RL7 3174 aa15.69■□□□□ 0.1
ATG4B-214ENST00000465399 KRBA1A5PL33 1030 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 ARHGEF35A5YM69 484 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
ATG4B-214ENST00000465399 RECQL4O94761 1208 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 PRKCBP05771 671 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 RPA1P27694 616 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 NAMPTP43490 491 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 ELAVL2Q12926 359 aaKnown RBP15.68■□□□□ 0.1
ATG4B-214ENST00000465399 PPP2R5AQ15172 486 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 PSMD5Q16401 504 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 FAM171A1Q5VUB5 890 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 PDXDC1Q6P996 788 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 DEPTORQ8TB45 409 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 PIK3R5Q8WYR1 880 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 FBXW11Q9UKB1 542 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 ZFP37Q9Y6Q3 630 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-214ENST00000465399 CITO14578 2027 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 SPTBN4Q9H254 2564 aa15.68■□□□□ 0.1
ATG4B-214ENST00000465399 TTLL13PA6NNM8 815 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 ACKR2O00590 384 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 PTGESO14684 152 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 OR52Z1P0C646 297 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 LIG1P18858 919 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 FSHRP23945 695 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 ORC2Q13416 577 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-214ENST00000465399 HTR4Q13639 388 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 PPM1LQ5SGD2 360 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 HAUS3Q68CZ6 603 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 PADI6Q6TGC4 694 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 NOSTRINQ8IVI9 506 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 GPR152Q8TDT2 470 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 CLSTN3Q9BQT9 956 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 TBC1D17Q9HA65 648 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 DAXXQ9UER7 740 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms