RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TDGF1P13385 188 aa10.65□□□□□ -0.7
APP-213ENST00000464867 SLC11A1P49279 550 aa10.65□□□□□ -0.7
APP-213ENST00000464867 NLRP11P59045 1033 aaKnown RBP10.65□□□□□ -0.7
APP-213ENST00000464867 ZNF252P-AS1Q0IIN9 211 aa10.65□□□□□ -0.7
APP-213ENST00000464867 SF3A2Q15428 464 aaKnown RBP10.65□□□□□ -0.7
APP-213ENST00000464867 SPATA31D4Q6ZUB0 917 aa10.65□□□□□ -0.7
APP-213ENST00000464867 PALB2Q86YC2 1186 aa10.65□□□□□ -0.7
APP-213ENST00000464867 CKAP2LQ8IYA6 745 aa10.65□□□□□ -0.7
APP-213ENST00000464867 URGCPQ8TCY9 931 aa10.65□□□□□ -0.7
APP-213ENST00000464867 VN1R3Q9BXE9 311 aa10.65□□□□□ -0.7
APP-213ENST00000464867 CHRDQ9H2X0 955 aa10.65□□□□□ -0.7
APP-213ENST00000464867 ADAMTS10Q9H324 1103 aa10.65□□□□□ -0.7
APP-213ENST00000464867 RIOX1Q9H6W3 641 aa10.65□□□□□ -0.7
APP-213ENST00000464867 JADE2Q9NQC1 790 aa10.65□□□□□ -0.7
APP-213ENST00000464867 RXFP3Q9NSD7 469 aa10.65□□□□□ -0.7
APP-213ENST00000464867 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
APP-213ENST00000464867 MAD2L2Q9UI95 211 aa10.65□□□□□ -0.7
APP-213ENST00000464867 NDRG2Q9UN36 371 aaKnown RBP10.65□□□□□ -0.7
APP-213ENST00000464867 COL4A3Q01955 1670 aa10.65□□□□□ -0.7
APP-213ENST00000464867 MYH9P35579 1960 aaKnown RBP10.65□□□□□ -0.71
APP-213ENST00000464867 ADAMTS20P59510 1910 aa10.64□□□□□ -0.71
APP-213ENST00000464867 DMXL2Q8TDJ6 3036 aa10.64□□□□□ -0.71
APP-213ENST00000464867 F5P12259 2224 aa10.64□□□□□ -0.71
APP-213ENST00000464867 SPAG17Q6Q759 2223 aa10.64□□□□□ -0.71
APP-213ENST00000464867 PALM3A6NDB9 673 aaPredicted RBP10.64□□□□□ -0.71
APP-213ENST00000464867 CHURC1-FNTBB4DL54 471 aa10.64□□□□□ -0.71
APP-213ENST00000464867 B4E1Z4 1266 aa10.64□□□□□ -0.71
APP-213ENST00000464867 SOD2P04179 222 aa10.64□□□□□ -0.71
APP-213ENST00000464867 SPINK2P20155 84 aa10.64□□□□□ -0.71
APP-213ENST00000464867 LORP23490 312 aaPredicted RBP10.64□□□□□ -0.71
APP-213ENST00000464867 FNTBP49356 437 aa10.64□□□□□ -0.71
APP-213ENST00000464867 GLUD2P49448 558 aa10.64□□□□□ -0.71
APP-213ENST00000464867 SOWAHCQ53LP3 525 aaPredicted RBP10.64□□□□□ -0.71
APP-213ENST00000464867 RNF43Q68DV7 783 aa10.64□□□□□ -0.71
APP-213ENST00000464867 LONP2Q86WA8 852 aa10.64□□□□□ -0.71
APP-213ENST00000464867 KXD1Q9BQD3 176 aa10.64□□□□□ -0.71
APP-213ENST00000464867 ARRDC1-AS1Q9H2J1 176 aa10.64□□□□□ -0.71
APP-213ENST00000464867 CHST12Q9NRB3 414 aa10.64□□□□□ -0.71
APP-213ENST00000464867 ZSWIM5Q9P217 1185 aa10.64□□□□□ -0.71
APP-213ENST00000464867 DNAJB4Q9UDY4 337 aa10.64□□□□□ -0.71
APP-213ENST00000464867 STK17AQ9UEE5 414 aa10.64□□□□□ -0.71
APP-213ENST00000464867 CEP131Q9UPN4 1083 aa10.64□□□□□ -0.71
APP-213ENST00000464867 UBIAD1Q9Y5Z9 338 aa10.64□□□□□ -0.71
APP-213ENST00000464867 AKAP13Q12802 2813 aa10.64□□□□□ -0.71
APP-213ENST00000464867 SPDYE3A6NKU9 549 aa10.63□□□□□ -0.71
APP-213ENST00000464867 MAGEB2O15479 319 aa10.63□□□□□ -0.71
APP-213ENST00000464867 PAPLNO95428 1278 aa10.63□□□□□ -0.71
APP-213ENST00000464867 KIF5BP33176 963 aa10.63□□□□□ -0.71
APP-213ENST00000464867 PHKA2P46019 1235 aa10.63□□□□□ -0.71
APP-213ENST00000464867 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
APP-213ENST00000464867 FZD5Q13467 585 aa10.63□□□□□ -0.71
APP-213ENST00000464867 LONRF3Q496Y0 759 aa10.63□□□□□ -0.71
APP-213ENST00000464867 TWF2Q6IBS0 349 aaKnown RBP10.63□□□□□ -0.71
APP-213ENST00000464867 GRASPQ7Z6J2 395 aaPredicted RBP10.63□□□□□ -0.71
APP-213ENST00000464867 PI4K2BQ8TCG2 481 aa10.63□□□□□ -0.71
APP-213ENST00000464867 PIBF1Q8WXW3 757 aa10.63□□□□□ -0.71
APP-213ENST00000464867 GATA6Q92908 595 aa10.63□□□□□ -0.71
APP-213ENST00000464867 FGF13Q92913 245 aa10.63□□□□□ -0.71
APP-213ENST00000464867 EVI5LQ96CN4 794 aa10.63□□□□□ -0.71
APP-213ENST00000464867 PGBD4Q96DM1 585 aa10.63□□□□□ -0.71
APP-213ENST00000464867 LOXL4Q96JB6 756 aa10.63□□□□□ -0.71
APP-213ENST00000464867 TMEM175Q9BSA9 504 aa10.63□□□□□ -0.71
APP-213ENST00000464867 HERC2P3Q9BVR0 1158 aa10.63□□□□□ -0.71
APP-213ENST00000464867 SCNM1Q9BWG6 230 aa10.63□□□□□ -0.71
APP-213ENST00000464867 KRT23Q9C075 422 aa10.63□□□□□ -0.71
APP-213ENST00000464867 LMAN1LQ9HAT1 526 aa10.63□□□□□ -0.71
APP-213ENST00000464867 ZNF302Q9NR11 478 aa10.63□□□□□ -0.71
APP-213ENST00000464867 HEBP1Q9NRV9 189 aa10.63□□□□□ -0.71
APP-213ENST00000464867 KANSL3Q9P2N6 904 aa10.63□□□□□ -0.71
APP-213ENST00000464867 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
APP-213ENST00000464867 NFASCO94856 1347 aa10.62□□□□□ -0.71
APP-213ENST00000464867 MEIS2O14770 477 aa10.62□□□□□ -0.71
APP-213ENST00000464867 C22orf31O95567 290 aa10.62□□□□□ -0.71
APP-213ENST00000464867 NCLP19338 710 aaKnown RBP10.62□□□□□ -0.71
APP-213ENST00000464867 SRSF5Q13243 272 aaKnown RBP10.62□□□□□ -0.71
APP-213ENST00000464867 TMEM259Q4ZIN3 620 aa10.62□□□□□ -0.71
APP-213ENST00000464867 DAB2IPQ5VWQ8 1189 aa10.62□□□□□ -0.71
APP-213ENST00000464867 HEATR6Q6AI08 1181 aaKnown RBP10.62□□□□□ -0.71
APP-213ENST00000464867 EFCAB12Q6NXP0 572 aa10.62□□□□□ -0.71
APP-213ENST00000464867 DNASE1L2Q92874 299 aa10.62□□□□□ -0.71
APP-213ENST00000464867 LPPQ93052 612 aa10.62□□□□□ -0.71
APP-213ENST00000464867 RXFP1Q9HBX9 757 aa10.62□□□□□ -0.71
APP-213ENST00000464867 TMPRSS4Q9NRS4 437 aa10.62□□□□□ -0.71
APP-213ENST00000464867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.62□□□□□ -0.71
APP-213ENST00000464867 KCNH7Q9NS40 1196 aa10.62□□□□□ -0.71
APP-213ENST00000464867 POLIQ9UNA4 740 aa10.62□□□□□ -0.71
APP-213ENST00000464867 BPTFQ12830 3046 aa10.62□□□□□ -0.71
APP-213ENST00000464867 TGM5O43548 720 aa10.61□□□□□ -0.71
APP-213ENST00000464867 XYLBO75191 536 aa10.61□□□□□ -0.71
APP-213ENST00000464867 OFD1O75665 1012 aa10.61□□□□□ -0.71
APP-213ENST00000464867 ATG7O95352 703 aa10.61□□□□□ -0.71
APP-213ENST00000464867 DARSP14868 501 aaKnown RBP10.61□□□□□ -0.71
APP-213ENST00000464867 RAB27AP51159 221 aa10.61□□□□□ -0.71
APP-213ENST00000464867 SATB1Q01826 763 aa10.61□□□□□ -0.71
APP-213ENST00000464867 CREMQ03060 361 aa10.61□□□□□ -0.71
APP-213ENST00000464867 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
APP-213ENST00000464867 GRM4Q14833 912 aa10.61□□□□□ -0.71
APP-213ENST00000464867 CCDC6Q16204 474 aa10.61□□□□□ -0.71
APP-213ENST00000464867 LIN9Q5TKA1 542 aa10.61□□□□□ -0.71
APP-213ENST00000464867 MIS18BP1Q6P0N0 1132 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms