RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 PITPNM3Q9BZ71 974 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 DMAC2Q9NW81 257 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 R3HDM2Q9Y2K5 976 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 PLIN4Q96Q06 1357 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 MAP3K13O43283 966 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 LINGO3P0C6S8 592 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 IVDP26440 423 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 WDR4P57081 412 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 ZNF449Q6P9G9 518 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 CYFIP1Q7L576 1253 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 CNKSR1Q969H4 720 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 FAM84AQ96KN4 292 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 NINJ2Q9NZG7 142 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 GGA1Q9UJY5 639 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 CDK5RAP2Q96SN8 1893 aa13.47□□□□□ -0.25
CLCNKA-204ENST00000464764 UNC5CO95185 931 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 PDHA1P08559 390 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 HSPA6P17066 643 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 RHBDF2Q6PJF5 856 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 GBP7Q8N8V2 638 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 PLEKHO2Q8TD55 490 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 ZBTB10Q96DT7 871 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 RPS6KC1Q96S38 1066 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 CBWD1Q9BRT8 395 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 WNT8AQ9H1J5 351 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 RPS6KA4O75676 772 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 BCRP11274 1271 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 TUBP50607 506 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 CYP4F22Q6NT55 531 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 CAPN12Q6ZSI9 719 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 CROCCP2Q86T23 111 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 VSIG1Q86XK7 387 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 CERS5Q8N5B7 392 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 EPS8L1Q8TE68 723 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 PARD3BQ8TEW8 1205 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 SLC5A5Q92911 643 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 ZNF653Q96CK0 615 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 NAF1Q96HR8 494 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 WDR18Q9BV38 432 aa13.46□□□□□ -0.25
CLCNKA-204ENST00000464764 GOLGA8IPA6NC78 632 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 GOLGA8JA6NMD2 632 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 O00370 1275 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 GAP43P17677 238 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 ADCY8P40145 1251 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 BLMHQ13867 455 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 PPM1KQ8N3J5 372 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 TTC8Q8TAM2 541 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 CHKBQ9Y259 395 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 EIF3DO15371 548 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 CBX6O95503 412 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 CCNB1P14635 433 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 GBP1P32455 592 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 HADHBP55084 474 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 RWDD2BP57060 319 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 TMED2Q15363 201 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 MTFR1Q15390 333 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 OTOP1Q7RTM1 612 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 SIAH1Q8IUQ4 282 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 SPIRE2Q8WWL2 714 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 SAAL1Q96ER3 474 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 FAM20AQ96MK3 541 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 POLR3CQ9BUI4 534 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 OSBPL1AQ9BXW6 950 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 KIAA1683Q9H0B3 1180 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 LRRC19Q9H756 370 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 DPPA5A6NC42 116 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 SREBF1P36956 1147 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 RAD23BP54727 409 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 C1orf220Q5T0J3 134 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 SUPT20HQ8NEM7 779 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 RPGRQ92834 1020 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 KREMEN1Q96MU8 473 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 MKNK1Q9BUB5 465 aa13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 NOCTQ9UK39 431 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-204ENST00000464764 SMCHD1A6NHR9 2005 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 RASA4BC9J798 803 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 RASA4O43374 803 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 ENTPD5O75356 428 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 PIAS1O75925 651 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 EPHB2P29323 1055 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 INHBEP58166 350 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 FMO1Q01740 532 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 AP3B2Q13367 1082 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 FBXO11Q86XK2 927 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 CNBD1Q8NA66 436 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 MAGEB18Q96M61 343 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 AMNQ9BXJ7 453 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 KCNQ5Q9NR82 932 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 NKIRAS1Q9NYS0 192 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 PKD2L1Q9P0L9 805 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 ANAPC5Q9UJX4 755 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 GRID1Q9ULK0 1009 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms