RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 PRKD2Q9BZL6 878 aa16.96■□□□□ 0.31
CMSS1-202ENST00000463526 TMEM60Q9H2L4 133 aa16.96■□□□□ 0.31
CMSS1-202ENST00000463526 SNTG2Q9NY99 539 aa16.96■□□□□ 0.31
CMSS1-202ENST00000463526 EPS15L1Q9UBC2 864 aa16.96■□□□□ 0.31
CMSS1-202ENST00000463526 WNT16Q9UBV4 365 aa16.96■□□□□ 0.31
CMSS1-202ENST00000463526 DENND4AQ7Z401 1863 aa16.96■□□□□ 0.31
CMSS1-202ENST00000463526 CFAP54Q96N23 3096 aa16.96■□□□□ 0.31
CMSS1-202ENST00000463526 TTLL13PA6NNM8 815 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 SPATA31C1P0DKV0 1188 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 MCM7P33993 719 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 SPECC1Q5M775 1068 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 RTP2Q5QGT7 225 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 LILRA6Q6PI73 481 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 POTEGQ6S5H5 508 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 ZBTB8OSQ8IWT0 167 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 ADSSL1Q8N142 457 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 NSUN7Q8NE18 718 aaKnown RBP16.95■□□□□ 0.3
CMSS1-202ENST00000463526 GPR152Q8TDT2 470 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 TBC1D17Q9HA65 648 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 PRMT7Q9NVM4 692 aaPredicted RBP16.95■□□□□ 0.3
CMSS1-202ENST00000463526 ZDHHC7Q9NXF8 308 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 FNIP2Q9P278 1114 aa16.95■□□□□ 0.3
CMSS1-202ENST00000463526 FAM186AA6NE01 2351 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 MED24O75448 989 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 SRFP11831 508 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 XRCC6P12956 609 aaKnown RBP eCLIP16.94■□□□□ 0.3
CMSS1-202ENST00000463526 LAMP2P13473 410 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 NTHL1P78549 312 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 GUCY1B3Q02153 619 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 TUSC3Q13454 348 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 FAM171A1Q5VUB5 890 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 CATSPER3Q86XQ3 398 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 NOSTRINQ8IVI9 506 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 KCNG4Q8TDN1 519 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 RHOBTB2Q9BYZ6 727 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 CXCL16Q9H2A7 254 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 POLD4Q9HCU8 107 aa16.94■□□□□ 0.3
CMSS1-202ENST00000463526 SF3B1O75533 1304 aaKnown RBP eCLIP16.94■□□□□ 0.31e-6■■■■■ 124.9
CMSS1-202ENST00000463526 ZMYND10O75800 440 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 KIF4AO95239 1232 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 FSHRP23945 695 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 ANAPC15P60006 121 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 CREMQ03060 361 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 PRPF4BQ13523 1007 aaKnown RBP16.93■□□□□ 0.3
CMSS1-202ENST00000463526 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 GRASPQ7Z6J2 395 aaPredicted RBP16.93■□□□□ 0.3
CMSS1-202ENST00000463526 MCPH1Q8NEM0 835 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 BSNDQ8WZ55 320 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 TTPALQ9BTX7 342 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 FZD8Q9H461 694 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 PDZD7Q9H5P4 517 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.93■□□□□ 0.3
CMSS1-202ENST00000463526 POLIQ9UNA4 740 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 NUMBLQ9Y6R0 609 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 ARID2Q68CP9 1835 aa16.93■□□□□ 0.3
CMSS1-202ENST00000463526 PTGESO14684 152 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 N4BP3O15049 544 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 CCL16O15467 120 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 RECQL4O94761 1208 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 PRKCBP05771 671 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 THP07101 528 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 DCNP07585 359 aaKnown RBP16.92■□□□□ 0.3
CMSS1-202ENST00000463526 NEK4P51957 841 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 ZNF174Q15697 407 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 PSMD5Q16401 504 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 LIN9Q5TKA1 542 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 PADI6Q6TGC4 694 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 GPR65Q8IYL9 337 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 NXPE3Q969Y0 559 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 PRIMPOLQ96LW4 560 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 NACC1Q96RE7 527 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 CLSTN3Q9BQT9 956 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 RPP25Q9BUL9 199 aaKnown RBP16.92■□□□□ 0.3
CMSS1-202ENST00000463526 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 GDAQ9Y2T3 454 aa16.92■□□□□ 0.3
CMSS1-202ENST00000463526 TDRD15B5MCY1 1934 aaKnown RBP16.92■□□□□ 0.3
CMSS1-202ENST00000463526 ARHGEF35A5YM69 484 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 ADAM12O43184 909 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 HTR4Q13639 388 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 MAPK6Q16659 721 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 PPM1LQ5SGD2 360 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 EEF1DP3Q658K8 133 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 CDCA2Q69YH5 1023 aaPredicted RBP16.91■□□□□ 0.3
CMSS1-202ENST00000463526 DEPTORQ8TB45 409 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 LNX1Q8TBB1 728 aaPredicted RBP16.91■□□□□ 0.3
CMSS1-202ENST00000463526 C2orf40Q9H1Z8 148 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 ARHGEF3Q9NR81 526 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 FBXW11Q9UKB1 542 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 R4GN57 208 aa16.91■□□□□ 0.3
CMSS1-202ENST00000463526 ANHXE9PGG2 379 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 C1RP00736 705 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 EDN1P05305 212 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 C8AP07357 584 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 IGFBP6P24592 240 aaPredicted RBP16.9■□□□□ 0.3
CMSS1-202ENST00000463526 SAFBQ15424 915 aaKnown RBP eCLIP16.9■□□□□ 0.3
CMSS1-202ENST00000463526 FAM187BQ17R55 369 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 GLRA4Q5JXX5 417 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 DCLRE1AQ6PJP8 1040 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 PARM1Q6UWI2 310 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 PIK3R5Q8WYR1 880 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms