RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 METTL24Q5JXM2 366 aa4.73□□□□□ -1.65
CCT4-203ENST00000461540 SDE2Q6IQ49 451 aa4.73□□□□□ -1.65
CCT4-203ENST00000461540 LMBR1LQ6UX01 489 aa4.73□□□□□ -1.65
CCT4-203ENST00000461540 LRRTM3Q86VH5 581 aa4.73□□□□□ -1.65
CCT4-203ENST00000461540 CPEB3Q8NE35 698 aaKnown RBP4.73□□□□□ -1.65
CCT4-203ENST00000461540 IL17RAQ96F46 866 aa4.73□□□□□ -1.65
CCT4-203ENST00000461540 NDC1Q9BTX1 674 aa4.73□□□□□ -1.65
CCT4-203ENST00000461540 ENKD1Q9H0I2 346 aa4.73□□□□□ -1.65
CCT4-203ENST00000461540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.73□□□□□ -1.65
CCT4-203ENST00000461540 DKK2Q9UBU2 259 aa4.73□□□□□ -1.65
CCT4-203ENST00000461540 UNC119BA6NIH7 251 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 TGM5O43548 720 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 PROP1O75360 226 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 C1QL1O75973 258 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 IBSPP21815 317 aaPredicted RBP4.72□□□□□ -1.65
CCT4-203ENST00000461540 GZMKP49863 264 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 SCNN1BP51168 640 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 DUSP2Q05923 314 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 MRPL49Q13405 166 aaKnown RBP4.72□□□□□ -1.65
CCT4-203ENST00000461540 VPS72Q15906 364 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 DDB1Q16531 1140 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 ZBTB41Q5SVQ8 909 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 NOL8Q76FK4 1167 aaKnown RBP4.72□□□□□ -1.65
CCT4-203ENST00000461540 TAS1R1Q7RTX1 841 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 PLXDC1Q8IUK5 500 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 SLC44A3Q8N4M1 653 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 OR52N2Q8NGI0 321 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 GPR101Q96P66 508 aaPredicted RBP4.72□□□□□ -1.65
CCT4-203ENST00000461540 PDCD2LQ9BRP1 358 aa4.72□□□□□ -1.65
CCT4-203ENST00000461540 CPEB1Q9BZB8 566 aaKnown RBP4.72□□□□□ -1.65
CCT4-203ENST00000461540 PRSS38A1L453 326 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 LCHNA4D1U4 455 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 NRP2O60462 931 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 IGKV2-30P06310 120 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 PFKMP08237 780 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 POU3F2P20265 443 aaPredicted RBP4.71□□□□□ -1.66
CCT4-203ENST00000461540 LSP1P33241 339 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 GPR15P49685 360 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 WNT3AP56704 352 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 NRG3P56975 720 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 OCA2Q04671 838 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 MGAT5Q09328 741 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 PCBP1Q15365 356 aaKnown RBP eCLIP4.71□□□□□ -1.66
CCT4-203ENST00000461540 RUSC1-AS1Q66K80 236 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 XYLT1Q86Y38 959 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 HOMER1Q86YM7 354 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 MSL3Q8N5Y2 521 aaKnown RBP4.71□□□□□ -1.66
CCT4-203ENST00000461540 PDPRQ8NCN5 879 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 RNPC3Q96LT9 517 aaKnown RBP4.71□□□□□ -1.66
CCT4-203ENST00000461540 FDXACB1Q9BRP7 624 aaPredicted RBP4.71□□□□□ -1.66
CCT4-203ENST00000461540 LSM14BQ9BX40 385 aaKnown RBP4.71□□□□□ -1.66
CCT4-203ENST00000461540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.71□□□□□ -1.66
CCT4-203ENST00000461540 SPON1Q9HCB6 807 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 KCNG1Q9UIX4 513 aa4.71□□□□□ -1.66
CCT4-203ENST00000461540 SBNO2Q9Y2G9 1366 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 hCG_2014768A0A024R1R8 64 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 FAM83GA6ND36 823 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 PRR5-ARHGAP8B1AHC4 643 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 SEC24DO94855 1032 aaPredicted RBP4.7□□□□□ -1.66
CCT4-203ENST00000461540 OCRLQ01968 901 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 PPARAQ07869 468 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 UBE3CQ15386 1083 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 C16orf86Q6ZW13 317 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 DHX37Q8IY37 1157 aaKnown RBP4.7□□□□□ -1.66
CCT4-203ENST00000461540 ZNF610Q8N9Z0 462 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 SMC1BQ8NDV3 1235 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 NINJ1Q92982 152 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 ANO3Q9BYT9 981 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 MS4A5Q9H3V2 200 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 SPTLC3Q9NUV7 552 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 NUMBLQ9Y6R0 609 aa4.7□□□□□ -1.66
CCT4-203ENST00000461540 A0A1W2PR48 441 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 MARCH6O60337 910 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 RAB11FIP3O75154 756 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 HLA-DOAP06340 250 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 EGR2P11161 476 aaPredicted RBP4.69□□□□□ -1.66
CCT4-203ENST00000461540 DDX6P26196 483 aaKnown RBP eCLIP4.69□□□□□ -1.66
CCT4-203ENST00000461540 IGBP1P78318 339 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 SIM1P81133 766 aaPredicted RBP4.69□□□□□ -1.66
CCT4-203ENST00000461540 APBA1Q02410 837 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 TP53BP2Q13625 1128 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 FHL1Q13642 323 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 ZNF169Q14929 603 aaPredicted RBP4.69□□□□□ -1.66
CCT4-203ENST00000461540 TKFCQ3LXA3 575 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 CCDC178Q5BJE1 867 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 GPR158Q5T848 1215 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 KIAA1614Q5VZ46 1190 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 FRMD7Q6ZUT3 714 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 DOK3Q7L591 496 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 NIM1KQ8IY84 436 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 AHI1Q8N157 1196 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 ASB10Q8WXI3 467 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 APPBP2Q92624 585 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 PIF1Q9H611 641 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 FANCLQ9NW38 375 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 ZNF580Q9UK33 172 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 CLCA2Q9UQC9 943 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 TBX22Q9Y458 520 aa4.69□□□□□ -1.66
CCT4-203ENST00000461540 POLR2AP24928 1970 aaKnown RBP4.68□□□□□ -1.66
CCT4-203ENST00000461540 LEFTY2O00292 366 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms