RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GCM1Q9NP62 436 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 NLRC4Q9NPP4 1024 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 LANCL2Q9NS86 450 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 SPATA6Q9NWH7 488 aaPredicted RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 RTEL1Q9NZ71 1219 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 NCDNQ9UBB6 729 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 STAP2Q9UGK3 403 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 L1RE1Q9UN81 338 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 SMG5Q9UPR3 1016 aaKnown RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 ZDHHC9Q9Y397 364 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 PCDHA3Q9Y5H8 950 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 SNX13Q9Y5W8 968 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 A0A1W2PPL8 197 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 LRRC14BA6NHZ5 514 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 NRP1O14786 923 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 ITGA10O75578 1167 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 KLHL18O94889 574 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 GASTP01350 101 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 PLA2G1BP04054 148 aaKnown RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 COL6A1P12109 1028 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 GYPEP15421 78 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 ZNF28P17035 718 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 AGFG1P52594 562 aaKnown RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 GJA9P57773 515 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 RAB1AP62820 205 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 DSC2Q02487 901 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 SEMA5AQ13591 1074 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 MORC3Q14149 939 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 USP10Q14694 798 aaKnown RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 RAB39AQ14964 217 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 POLD3Q15054 466 aaPredicted RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 ZRSR2Q15696 482 aaKnown RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 MCTP2Q6DN12 878 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 C1orf228Q6PIY5 440 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 Q6ZVL8 140 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 PDZD4Q76G19 769 aaPredicted RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 GPR155Q7Z3F1 870 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 CLEC14AQ86T13 490 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 SPICE1Q8N0Z3 855 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 VPS37AQ8NEZ2 397 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 OR7D4Q8NG98 312 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 GJA10Q969M2 543 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 SLC7A6OSQ96CW6 309 aaPredicted RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 FAM167AQ96KS9 214 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 TBCBQ99426 244 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 CDC5LQ99459 802 aaKnown RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 PDCD2LQ9BRP1 358 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 LRRC27Q9C0I9 530 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 KIAA1683Q9H0B3 1180 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 LDAHQ9H6V9 325 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 BCO1Q9HAY6 547 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 SARS2Q9NP81 518 aaKnown RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 KLHL11Q9NVR0 708 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 PNPOQ9NVS9 261 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 ING3Q9NXR8 418 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 GPRC5DQ9NZD1 345 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 ABCF2Q9UG63 623 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 TAGLN3Q9UI15 199 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 CPA4Q9UI42 421 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 CNOT6Q9ULM6 557 aaKnown RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 TPCN1Q9ULQ1 816 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 DMTF1Q9Y222 760 aa3.92□□□□□ -1.78
VCL-203ENST00000461383 MYBBP1AQ9BQG0 1328 aaKnown RBP3.92□□□□□ -1.78
VCL-203ENST00000461383 RHPN2P1A8MT19 583 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 B8ZZF3 427 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 GPR32O75388 356 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 TOX4O94842 621 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 INHBBP09529 407 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 PI3P19957 117 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 CRHR1P34998 444 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 SREBF1P36956 1147 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 KIR2DL3P43628 341 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 HTR3AP46098 478 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 SARSP49591 514 aaKnown RBP3.91□□□□□ -1.78
VCL-203ENST00000461383 HK3P52790 923 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 ZNF280AP59817 542 aaPredicted RBP3.91□□□□□ -1.78
VCL-203ENST00000461383 BPIFB4P59827 614 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 CREMQ03060 361 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 TARDBPQ13148 414 aaKnown RBP eCLIP3.91□□□□□ -1.783e-9■■■■□ 24.6
VCL-203ENST00000461383 AGBL4Q5VU57 503 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 TRIM68Q6AZZ1 485 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 CYB5RLQ6IPT4 315 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 TSHZ1Q6ZSZ6 1077 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 Q6ZUG5 572 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 USP30Q70CQ3 517 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 LARP4Q71RC2 724 aaKnown RBP eCLIP3.91□□□□□ -1.78
VCL-203ENST00000461383 TMEFF1Q8IYR6 380 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 ENAHQ8N8S7 591 aaPredicted RBP3.91□□□□□ -1.78
VCL-203ENST00000461383 FBXO18Q8NFZ0 1043 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 OR5M3Q8NGP4 307 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 BRIX1Q8TDN6 353 aaKnown RBP3.91□□□□□ -1.78
VCL-203ENST00000461383 STON2Q8WXE9 905 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 CCDC138Q96M89 665 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 SPATA25Q9BR10 227 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 NAA15Q9BXJ9 866 aaKnown RBP3.91□□□□□ -1.78
VCL-203ENST00000461383 OR10A2Q9H208 303 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 EPC1Q9H2F5 836 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 MOCS1Q9NZB8 636 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 CALCOCO1Q9P1Z2 691 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 TRPS1Q9UHF7 1281 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms