RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 MARCH5Q9NX47 278 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 LARSQ9P2J5 1176 aaKnown RBP16.91■□□□□ 0.3
VARS-219ENST00000461328 ARHGAP28Q9P2N2 729 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 RBM19Q9Y4C8 960 aaKnown RBP16.91■□□□□ 0.3
VARS-219ENST00000461328 IRAK3Q9Y616 596 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 PI4K2BG5E9Z4 385 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 EDN1P05305 212 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 GRIK3Q13003 919 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 STRN3Q13033 797 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 PTPN14Q15678 1187 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 TPRNQ4KMQ1 711 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 RRAGBQ5VZM2 374 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 EEF1DP3Q658K8 133 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 SYCE2Q6PIF2 218 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 REEP2Q9BRK0 252 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 EMILIN2Q9BXX0 1053 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 TMEM134Q9H6X4 195 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 MRPL17Q9NRX2 175 aaKnown RBP16.9■□□□□ 0.3
VARS-219ENST00000461328 BLOC1S4Q9NUP1 217 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 SNTG2Q9NY99 539 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 TFIP11Q9UBB9 837 aaKnown RBP16.9■□□□□ 0.3
VARS-219ENST00000461328 STK17AQ9UEE5 414 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 KCNG1Q9UIX4 513 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 ODF2LQ9ULJ1 636 aa16.9■□□□□ 0.3
VARS-219ENST00000461328 H0YCG3 227 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 SPTLC2O15270 562 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 RECQL4O94761 1208 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 URODP06132 367 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 HARSP12081 509 aaKnown RBP16.89■□□□□ 0.29
VARS-219ENST00000461328 ALADP13716 330 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 ZNF568Q3ZCX4 644 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 NT5DC1Q5TFE4 455 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 PPFIBP1Q86W92 1011 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 GSTCDQ8NEC7 633 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 LRRC15Q8TF66 581 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 SPIRE2Q8WWL2 714 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 SUSD6Q92537 303 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 BICD1Q96G01 975 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 HERC2P3Q9BVR0 1158 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 COLEC11Q9BWP8 271 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 PHF7Q9BWX1 381 aaPredicted RBP16.89■□□□□ 0.29
VARS-219ENST00000461328 S1PR5Q9H228 398 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 DAXXQ9UER7 740 aaPredicted RBP16.89■□□□□ 0.29
VARS-219ENST00000461328 GDAQ9Y2T3 454 aa16.89■□□□□ 0.29
VARS-219ENST00000461328 K7ENM7 598 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 C2CD2LO14523 706 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 DCXO43602 365 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 YEATS4O95619 227 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 SOD2P04179 222 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 STAT6P42226 847 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 PKP1Q13835 747 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 CBX2Q14781 532 aaPredicted RBP16.88■□□□□ 0.29
VARS-219ENST00000461328 ARSHQ5FYA8 562 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 TMEM31Q5JXX7 168 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 CES5AQ6NT32 575 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 MYCT1Q8N699 235 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 LINC00301Q8NCQ3 95 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 TCHPQ9BT92 498 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 TARS2Q9BW92 718 aaKnown RBP16.88■□□□□ 0.29
VARS-219ENST00000461328 PARVGQ9HBI0 331 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 DZANK1Q9NVP4 752 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 TNFSF13BQ9Y275 285 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 SSX2IPQ9Y2D8 614 aa16.88■□□□□ 0.29
VARS-219ENST00000461328 MORC2Q9Y6X9 1032 aaPredicted RBP16.88■□□□□ 0.29
VARS-219ENST00000461328 TDRD15B5MCY1 1934 aaKnown RBP16.88■□□□□ 0.29
VARS-219ENST00000461328 F8W810 466 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 EPCAMP16422 314 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 KLRC2P26717 231 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 DDIT3P35638 169 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 MATR3P43243 847 aaKnown RBP eCLIP16.87■□□□□ 0.29
VARS-219ENST00000461328 GLUD2P49448 558 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 TUSC3Q13454 348 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 BECN1Q14457 450 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 KIAA1841Q6NSI8 718 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 TAS1R3Q7RTX0 852 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 ZBTB33Q86T24 672 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 RNF135Q8IUD6 432 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 TMEM161BQ8NDZ6 487 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 SLC22A17Q8WUG5 538 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 RPGRIP1Q96KN7 1286 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 KLHL5Q96PQ7 755 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 ACO2Q99798 780 aaKnown RBP16.87■□□□□ 0.29
VARS-219ENST00000461328 ANKFY1Q9P2R3 1169 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 MYH15Q9Y2K3 1946 aa16.87■□□□□ 0.29
VARS-219ENST00000461328 FAM86C2PA6NEL3 165 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 SPDYE4A6NLX3 237 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 PPP6R2O75170 966 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 TADA2AO75478 443 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 THP07101 528 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 CNPP09543 421 aaKnown RBP16.86■□□□□ 0.29
VARS-219ENST00000461328 MAPTP10636 758 aaKnown RBP16.86■□□□□ 0.29
VARS-219ENST00000461328 COL9A1P20849 921 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 YARSP54577 528 aaKnown RBP16.86■□□□□ 0.29
VARS-219ENST00000461328 ITIH3Q06033 890 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 RARS2Q5T160 578 aaKnown RBP16.86■□□□□ 0.29
VARS-219ENST00000461328 SV2BQ7L1I2 683 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 TAS1R1Q7RTX1 841 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 PDILTQ8N807 584 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 KCNG4Q8TDN1 519 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms