RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 SPIRE2Q8WWL2 714 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 USP28Q96RU2 1077 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 REEP2Q9BRK0 252 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 TCHPQ9BT92 498 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 TARS2Q9BW92 718 aaKnown RBP17.81■□□□□ 0.44
CPSF6-203ENST00000456847 CCSER1Q9C0I3 900 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 BLOC1S4Q9NUP1 217 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 DAXXQ9UER7 740 aaPredicted RBP17.81■□□□□ 0.44
CPSF6-203ENST00000456847 CCDC39Q9UFE4 941 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 ODF2LQ9ULJ1 636 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 IRAK3Q9Y616 596 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 TRIP11Q15643 1979 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 CASTOR2A6NHX0 329 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 SPDYE4A6NLX3 237 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 THP07101 528 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 TUSC3Q13454 348 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 KCNC3Q14003 757 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 LARP4BQ92615 738 aaKnown RBP17.8■□□□□ 0.44
CPSF6-203ENST00000456847 RABGGTAQ92696 567 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 CCDC94Q9BW85 323 aaPredicted RBP17.8■□□□□ 0.44
CPSF6-203ENST00000456847 CDT1Q9H211 546 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 ZHX3Q9H4I2 956 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 SRPRBQ9Y5M8 271 aaKnown RBP17.8■□□□□ 0.44
CPSF6-203ENST00000456847 CITO14578 2027 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 F8W810 466 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 H0YCG3 227 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 TBCAO75347 108 aaKnown RBP17.8■□□□□ 0.44
CPSF6-203ENST00000456847 GLUD2P49448 558 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 YARSP54577 528 aaKnown RBP17.8■□□□□ 0.44
CPSF6-203ENST00000456847 OSTNP61366 133 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 TPRNQ4KMQ1 711 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 ARSHQ5FYA8 562 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 FOXD4L5Q5VV16 416 aaPredicted RBP17.8■□□□□ 0.44
CPSF6-203ENST00000456847 KIAA1841Q6NSI8 718 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 LRRC15Q8TF66 581 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 FOXD4L4Q8WXT5 416 aaPredicted RBP17.8■□□□□ 0.44
CPSF6-203ENST00000456847 BICD1Q96G01 975 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 EPSTI1Q96J88 318 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 CLIC6Q96NY7 704 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 ANKFY1Q9P2R3 1169 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 CACNG4Q9UBN1 327 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 SSX2IPQ9Y2D8 614 aa17.8■□□□□ 0.44
CPSF6-203ENST00000456847 NCOR1O75376 2440 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 PTGESO14684 152 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 TADA2AO75478 443 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 HOXB8P17481 243 aaPredicted RBP17.79■□□□□ 0.44
CPSF6-203ENST00000456847 KLRC2P26717 231 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 MATR3P43243 847 aaKnown RBP eCLIP17.79■□□□□ 0.443e-7■■■■□ 23.1
CPSF6-203ENST00000456847 HSP90AA2PQ14568 343 aaPredicted RBP17.79■□□□□ 0.44
CPSF6-203ENST00000456847 STK38Q15208 465 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 FUT10Q6P4F1 479 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 MPZL3Q6UWV2 235 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 PPFIBP1Q86W92 1011 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 MYCT1Q8N699 235 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 TMEM161BQ8NDZ6 487 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 ADAM28Q9UKQ2 775 aa17.79■□□□□ 0.44
CPSF6-203ENST00000456847 K7ENM7 598 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
CPSF6-203ENST00000456847 GRM5P41594 1212 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 GLRA4Q5JXX5 417 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 SYCE2Q6PIF2 218 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 USP49Q70CQ1 688 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 CEP120Q8N960 986 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 HASPINQ8TF76 798 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 ZNF396Q96N95 335 aaPredicted RBP17.78■□□□□ 0.44
CPSF6-203ENST00000456847 KLHL5Q96PQ7 755 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 NTPCRQ9BSD7 190 aaKnown RBP17.78■□□□□ 0.44
CPSF6-203ENST00000456847 TOPORSQ9NS56 1045 aaPredicted RBP17.78■□□□□ 0.44
CPSF6-203ENST00000456847 DZANK1Q9NVP4 752 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 MCF2P10911 925 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 EPCAMP16422 314 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 NCKAP1LP55160 1127 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 CES5AQ6NT32 575 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 TAS1R1Q7RTX1 841 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 KRI1Q8N9T8 703 aaKnown RBP17.78■□□□□ 0.44
CPSF6-203ENST00000456847 SPRYD3Q8NCJ5 442 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 CXCL16Q9H2A7 254 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 PARVGQ9HBI0 331 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 STK17AQ9UEE5 414 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 PLXNA3P51805 1871 aa17.78■□□□□ 0.44
CPSF6-203ENST00000456847 CNPP09543 421 aaKnown RBP17.77■□□□□ 0.44
CPSF6-203ENST00000456847 NOLC1Q14978 699 aaKnown RBP eCLIP17.77■□□□□ 0.44
CPSF6-203ENST00000456847 SLC39A14Q15043 492 aa17.77■□□□□ 0.44
CPSF6-203ENST00000456847 RARS2Q5T160 578 aaKnown RBP17.77■□□□□ 0.44
CPSF6-203ENST00000456847 RRAGBQ5VZM2 374 aa17.77■□□□□ 0.44
CPSF6-203ENST00000456847 KHSRPQ92945 711 aaKnown RBP eCLIP17.77■□□□□ 0.444e-7■■■□□ 16.2
CPSF6-203ENST00000456847 PAAF1Q9BRP4 392 aa17.77■□□□□ 0.44
CPSF6-203ENST00000456847 PTPRHQ9HD43 1115 aa17.77■□□□□ 0.44
CPSF6-203ENST00000456847 SF3B1O75533 1304 aaKnown RBP eCLIP17.77■□□□□ 0.441e-6■■■■■ 28.3
CPSF6-203ENST00000456847 C19orf67A6NJJ6 358 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 ADH1AP07327 375 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 CBX2Q14781 532 aaPredicted RBP17.76■□□□□ 0.43
CPSF6-203ENST00000456847 USP41Q3LFD5 358 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 HAUS6Q7Z4H7 955 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 RNF168Q8IYW5 571 aaPredicted RBP17.76■□□□□ 0.43
CPSF6-203ENST00000456847 SLC22A17Q8WUG5 538 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 ZBTB45Q96K62 511 aaPredicted RBP17.76■□□□□ 0.43
CPSF6-203ENST00000456847 B3GALT6Q96L58 329 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 ACAP3Q96P50 834 aa17.76■□□□□ 0.43
CPSF6-203ENST00000456847 PHF7Q9BWX1 381 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms