RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 LPAL2Q16609 132 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SLC5A9Q2M3M2 681 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 EEF1DP3Q658K8 133 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DCLRE1AQ6PJP8 1040 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MOXD1Q6UVY6 613 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RUFY3Q7L099 469 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SRGAP1Q7Z6B7 1085 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NECAB1Q8N987 351 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CMASQ8NFW8 434 aaPredicted RBP6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 STAMQ92783 540 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CCDC43Q96MW1 224 aaKnown RBP6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 EIF2AK1Q9BQI3 630 aaKnown RBP6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RTP3Q9BQQ7 232 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PHF20Q9BVI0 1012 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NT5C3AQ9H0P0 336 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CSRNP2Q9H175 543 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GOLGA2P5Q9HBQ8 144 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 POLD4Q9HCU8 107 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 IGSF9Q9P2J2 1179 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FBXW11Q9UKB1 542 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ADAM28Q9UKQ2 775 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 COL4A2P08572 1712 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FRYQ5TBA9 3013 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 IGF2RP11717 2491 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ZFYVE26Q68DK2 2539 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ANHXE9PGG2 379 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GAS2O43903 313 aaKnown RBP6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 JAK2O60674 1132 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PAPLNO95428 1278 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ALDH2P05091 517 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PRKCBP05771 671 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 P4HBP07237 508 aaKnown RBP6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CEBPBP17676 345 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ATP2B1P20020 1258 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PSMA5P28066 241 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CDR1P51861 262 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 EVCP57679 992 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GRIK3Q13003 919 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GRM2Q14416 872 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 HSP90AA2PQ14568 343 aaPredicted RBP6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PSMD5Q16401 504 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TMEM132AQ24JP5 1023 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 LIN9Q5TKA1 542 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FAM171A1Q5VUB5 890 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TPRG1Q6ZUI0 275 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DGLUCYQ7Z3D6 616 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NOSTRINQ8IVI9 506 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NPAS3Q8IXF0 933 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 C4orf19Q8IY42 314 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ZNF710Q8N1W2 664 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FGF13Q92913 245 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 JPH2Q9BR39 696 aaPredicted RBP6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PRKD2Q9BZL6 878 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PDZD7Q9H5P4 517 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RXFP1Q9HBX9 757 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ZSWIM6Q9HCJ5 1215 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CHST7Q9NS84 486 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SPATA6Q9NWH7 488 aaPredicted RBP6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 WNT16Q9UBV4 365 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TPCN1Q9ULQ1 816 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GDAQ9Y2T3 454 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SIT1Q9Y3P8 196 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CYP46A1Q9Y6A2 500 aa6.65□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NCANO14594 1321 aa6.65□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SF3B1O75533 1304 aaKnown RBP eCLIP6.65□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CHD6Q8TD26 2715 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TBX3O15119 743 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MEFVO15553 781 aaPredicted RBP6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NEMFO60524 1076 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TADA2AO75478 443 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZMYND10O75800 440 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 KRT37O76014 449 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SLITRK3O94933 977 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 REC8O95072 547 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 GCFC2P16383 781 aaKnown RBP6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 KCNA4P22459 653 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TARSP26639 723 aaKnown RBP6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TKTP29401 623 aaKnown RBP6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RARRES1P49788 294 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CDC42EP1Q00587 391 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 GUCY1B3Q02153 619 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ST3GAL1Q11201 340 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TFDP1Q14186 410 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 EPHA7Q15375 998 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MLF2Q15773 248 aaPredicted RBP6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CALCRLQ16602 461 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 USP41Q3LFD5 358 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PPM1LQ5SGD2 360 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SLC27A1Q6PCB7 646 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 LILRA6Q6PI73 481 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CD300LGQ6UXG3 332 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RSPO2Q6UXX9 243 aaPredicted RBP6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FAM43BQ6ZT52 329 aaPredicted RBP6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ERMP1Q7Z2K6 904 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 C1orf210Q8IVY1 113 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FBXL16Q8N461 479 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CEP120Q8N960 986 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 C3orf58Q8NDZ4 430 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TCP11Q8WWU5 503 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TNFRSF25Q93038 417 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms