RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 AJUBAQ96IF1 538 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 SIGLEC10Q96LC7 697 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 YTHDC1Q96MU7 727 aaKnown RBP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 MANSC1Q9H8J5 431 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 CALCOCO1Q9P1Z2 691 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 TRPS1Q9UHF7 1281 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 CNOT6Q9ULM6 557 aaKnown RBP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 KCTD3Q9Y597 815 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 CTDP1Q9Y5B0 961 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 NR2E3Q9Y5X4 410 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 ERCC6Q03468 1493 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 C2orf78A6NCI8 922 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 B8ZZF3 427 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 DAPK3O43293 454 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 MTSS1O43312 755 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 TRIM13O60858 407 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 PPFIA4O75335 1185 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 GASTP01350 101 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 HMGCRP04035 888 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 BMP7P18075 431 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 PI3P19957 117 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 ADSLP30566 484 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 GUCY1A2P33402 732 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 SREBF1P36956 1147 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 KCNQ1P51787 676 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 CTSWP56202 376 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 RAB1AP62820 205 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 ATP8B2P98198 1209 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 RAB39AQ14964 217 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 REXO1L1PQ8IX06 675 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 RHOT1Q8IXI2 618 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 MSL3Q8N5Y2 521 aaKnown RBP4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 C3orf20Q8ND61 904 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 OR7D4Q8NG98 312 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 ZNF480Q8WV37 535 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 LPPQ93052 612 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 IL17RAQ96F46 866 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 FAM167AQ96KS9 214 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 UIMC1Q96RL1 719 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 ARPC5LQ9BPX5 153 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 C22orf23Q9BZE7 217 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 NUP62CLQ9H1M0 184 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 ATP6V0A4Q9HBG4 840 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 PARD6AQ9NPB6 346 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 NLRC4Q9NPP4 1024 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 TDP1Q9NUW8 608 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 PMF1-BGLAPU3KQ54 211 aa4.69□□□□□ -1.66
HMGB1P15-201ENST00000453854 A0A0G2JLL6 359 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 SH3D21A4FU49 640 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 PRAMEF4O60810 478 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 PQBP1O60828 265 aaKnown RBP4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 ALDH1A2O94788 518 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 ARIH2O95376 493 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 AMY1AP04745 511 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 PEX2P28328 305 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 CRHR1P34998 444 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 KIR2DL3P43628 341 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 TLE1Q04724 770 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 POLD3Q15054 466 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 VWA3BQ502W6 1294 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 ZFYVE27Q5T4F4 411 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 C10orf62Q5T681 223 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 APOA5Q6Q788 366 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 COL23A1Q86Y22 540 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 PLA2G15Q8NCC3 412 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 IFI44Q8TCB0 444 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 PARD3BQ8TEW8 1205 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 LRTOMTQ8WZ04 291 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 ANKS1AQ92625 1134 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 CLPTM1LQ96KA5 538 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 KCNC2Q96PR1 638 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 MYD88Q99836 296 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 PDCD2LQ9BRP1 358 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 CARD11Q9BXL7 1154 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 C14orf93Q9H972 538 aaKnown RBP4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 RSAD1Q9HA92 442 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 GPRC5DQ9NZD1 345 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 PCDHGB6Q9Y5F9 930 aa4.68□□□□□ -1.66
HMGB1P15-201ENST00000453854 LRRC14BA6NHZ5 514 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 DDX3XO00571 662 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 FTH1P19P0C7X4 201 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 MYF5P13349 255 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 TYRP14679 529 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 ZKSCAN1P17029 563 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 PAX3P23760 479 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 MRE11P49959 708 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 ADAM15Q13444 863 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 FGL2Q14314 439 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 PLS1Q14651 629 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 PCOLCEQ15113 449 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 KHDC1Q4VXA5 237 aaKnown RBP4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 HEATR3Q7Z4Q2 680 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 FAM186BQ8IYM0 893 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 RTKN2Q8IZC4 609 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 PQLC1Q8N2U9 271 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 NME8Q8N427 588 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 ZGPATQ8N5A5 531 aaKnown RBP4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 CASKIN2Q8WXE0 1202 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 EVI5LQ96CN4 794 aa4.67□□□□□ -1.66
HMGB1P15-201ENST00000453854 PGBD4Q96DM1 585 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms