RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 PSMD14O00487 310 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 KIF5CO60282 957 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZEB2O60315 1214 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 NPHS1O60500 1241 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 ITGB3P05106 788 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 EPHX1P07099 455 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 CTAGE8P0CG41 777 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 HSPD1P10809 573 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 EPB41P11171 864 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 EIF2S2P20042 333 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 MCM3P25205 808 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 CASP7P55210 303 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 SETQ01105 290 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 GUCY1B3Q02153 619 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 ITIH3Q06033 890 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 PNOCQ13519 176 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 CUL4BQ13620 913 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 GNL2Q13823 731 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 KARSQ15046 597 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 SF3A1Q15459 793 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 PPP2R5EQ16537 467 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 LONRF3Q496Y0 759 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 PLEKHO1Q53GL0 409 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 PAPD7Q5XG87 772 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 OTUD7BQ6GQQ9 843 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 OLFM4Q6UX06 510 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 GBP6Q6ZN66 633 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 LRP10Q7Z4F1 713 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 YTHDF3Q7Z739 585 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 CTAGE6Q86UF2 777 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZNF761Q86XN6 746 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 CTAGE4Q8IX94 777 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 AMOTL1Q8IY63 956 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 SLC35F6Q8N357 371 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 JMYQ8N9B5 988 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 IGSF22Q8N9C0 903 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 NOA1Q8NC60 698 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 NETO2Q8NC67 525 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 COG1Q8WTW3 980 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 C8orf76Q96K31 380 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 RPGRIP1Q96KN7 1286 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 RBM15Q96T37 977 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 NAPGQ99747 312 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 DESI2Q9BSY9 194 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 DDX21Q9NR30 783 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 C9orf78Q9NZ63 289 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 NTMQ9P121 344 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 PUF60Q9UHX1 559 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 GGA2Q9UJY4 613 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 CNOT11Q9UKZ1 510 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 REXO2Q9Y3B8 237 aaKnown RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 NFE2L3Q9Y4A8 694 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 BACE2Q9Y5Z0 518 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 MAST3O60307 1309 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZMYM6O95789 1325 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 RGPD8O14715 1765 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 LTN1O94822 1766 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 PXDNQ92626 1479 aa4.62□□□□□ -1.67
HMGB3P22-202ENST00000451823 GLI3P10071 1580 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 A6NNZ2 444 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 FOXN1O15353 648 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 EIF3HO15372 352 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 RNMTO43148 476 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 TEX33O43247 280 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 ERLIN2O94905 339 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 TFRCP02786 760 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 ANXA1P04083 346 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 GYPCP04921 128 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 GPTP24298 496 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 GIPRP48546 466 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 PLCD1P51178 756 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 RBL2Q08999 1139 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 TFCP2Q12800 502 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 TRDNQ13061 729 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 PPFIA1Q13136 1202 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 PAK2Q13177 524 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 GCKRQ14397 625 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 SART3Q15020 963 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 NTRK3Q16288 839 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 PTPN21Q16825 1174 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 TUBB8Q3ZCM7 444 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 HSP90B2PQ58FF3 399 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZNF569Q5MCW4 686 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 WLSQ5T9L3 541 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 SLC9C2Q5TAH2 1124 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 SPATA1Q5VX52 437 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 KRT40Q6A162 431 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 WWC2Q6AWC2 1192 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 ISM2Q6H9L7 571 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 CD300LDQ6UXZ3 194 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCNI2Q6ZMN8 369 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 SYNE3Q6ZMZ3 975 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 SPATS2Q86XZ4 545 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 TMTC1Q8IUR5 882 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 FAM177A1Q8N128 213 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 LINC00482Q8N8I6 264 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 C1orf131Q8NDD1 294 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 MAGEC3Q8TD91 643 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 AENQ8WTP8 325 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 IP6K1Q92551 441 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms