RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RBP5P82980 135 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 PTK7Q13308 1070 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 GTF2H3Q13889 308 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SIM2Q14190 667 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 PKN1Q16512 942 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SV2CQ496J9 727 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SPATA31D4Q6ZUB0 917 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 MTSS1LQ765P7 747 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 PRICKLE2Q7Z3G6 844 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 VSIG10LQ86VR7 867 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 VPS52Q8N1B4 723 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 CPA6Q8N4T0 437 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 ADAMTS19Q8TE59 1207 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 PPP1R13LQ8WUF5 828 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 VPS50Q96JG6 964 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZNF112Q9UJU3 913 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 ITIH6Q6UXX5 1313 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 POTEFA5A3E0 1075 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 M0QYT0 321 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 KIAA0391O15091 583 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 CSF2RAP15509 400 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 EIF4BP23588 611 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 CD52P31358 61 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 PNPLA4P41247 253 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TTC23LQ6PF05 361 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SKAP1Q86WV1 359 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SH2D3AQ9BRG2 576 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 DDX23Q9BUQ8 820 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAF1Q9H063 256 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 RANBP17Q9H2T7 1088 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TRPM5Q9NZQ8 1165 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAPK8IP1Q9UQF2 711 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 Q9Y3F1 56 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 PCDHB3Q9Y5E6 796 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 MYO7AQ13402 2215 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 FAM86C2PA6NEL3 165 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TMEM110-MUSTN1A8MSY1 372 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SART1O43290 800 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 CDR1P51861 262 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 MNS1Q8NEH6 495 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 ALDH8A1Q9H2A2 487 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TXNDC16Q9P2K2 825 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 A0A087WZ62 844 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 POTEMA6NI47 508 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 MED7O43513 233 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 COL9A1P20849 921 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SCP2P22307 547 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 RBMS1P29558 406 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 CASP6P55212 293 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 GRB14Q14449 540 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TMEM132DQ14C87 1099 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TBC1D31Q96DN5 1066 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 RAD9AQ99638 391 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 FDXACB1Q9BRP7 624 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 NSUN3Q9H649 340 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 KLK14Q9P0G3 267 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SLC9A3R1O14745 358 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 GSPT1P15170 499 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 PTK2Q05397 1052 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 DUOXA2Q1HG44 320 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZNF699Q32M78 642 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 ARHGAP29Q52LW3 1261 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 RWDD4Q6NW29 188 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZIC5Q96T25 663 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SEL1LQ9UBV2 794 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 MKL2Q9ULH7 1088 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 KIF20BQ96Q89 1820 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 A0A1W2PRG0 241 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CCL16O15467 120 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 HARS2P49590 506 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 FOXC1Q12948 553 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ADAM9Q13443 819 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 KARSQ15046 597 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 VWA3BQ502W6 1294 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 NOMO2Q5JPE7 1267 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 MEI1Q5TIA1 1274 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 SLC24A5Q71RS6 500 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 RAB42Q8N4Z0 105 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 PPTC7Q8NI37 304 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 PIGKQ92643 395 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 NOC4LQ9BVI4 516 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 IFT122Q9HBG6 1241 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 PDGFCQ9NRA1 345 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 PGAP2Q9UHJ9 254 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 AGO2Q9UKV8 859 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 DSEQ9UL01 958 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 SYT1P21579 422 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 TAF6P49848 677 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ARL6IP4Q66PJ3 421 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ALKBH2Q6NS38 261 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 SLC39A5Q6ZMH5 540 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 SCARA5Q6ZMJ2 495 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CCDC50Q8IVM0 306 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CHPFQ8IZ52 775 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZFP14Q9HCL3 533 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CYP26B1Q9NR63 512 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 PCDHB4Q9Y5E5 795 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 SF3B1O75533 1304 aaKnown RBP eCLIP6.03□□□□□ -1.443e-6■■■■■ 39.3
CDC42BPA-209ENST00000448940 GNL1P36915 607 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms