RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 TATDN1Q6P1N9 297 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 SRGAP1Q7Z6B7 1085 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 UBE3DQ7Z6J8 389 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 KIAA1328Q86T90 577 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 COL23A1Q86Y22 540 aaPredicted RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 C1QL4Q86Z23 238 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 IRF2BP1Q8IU81 584 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ZSCAN29Q8IWY8 852 aaPredicted RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 MYOCDQ8IZQ8 938 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ZNF507Q8TCN5 953 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 EPS8L3Q8TE67 593 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 RPGRIP1Q96KN7 1286 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 FAM20AQ96MK3 541 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 WDR24Q96S15 920 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 PLIN2Q99541 437 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 MMTAG2Q9BU76 263 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 AMNQ9BXJ7 453 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 CPVLQ9H3G5 476 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 MRPL44Q9H9J2 332 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 LUC7LQ9NQ29 371 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 BLOC1S4Q9NUP1 217 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 HERC5Q9UII4 1024 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 HDAC9Q9UKV0 1011 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 PCDHA12Q9UN75 941 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 MAPK8IP1Q9UQF2 711 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 PCDHA1Q9Y5I3 950 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 EPN1Q9Y6I3 576 aaPredicted RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 PITPNM2Q9BZ72 1349 aa4.46□□□□□ -1.69
PTPN12-208ENST00000447995 ANKRD31Q8N7Z5 1873 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 ATRNL1Q5VV63 1379 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 ANO9A1A5B4 782 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CTAGE15A4D2H0 777 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CCDC151A5D8V7 595 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 MYMKA6NI61 221 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 EIF3CLB5ME19 914 aaKnown RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 PSMD14O00487 310 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 SLC37A4O43826 429 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 TSPAN15O95858 294 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 KRT18P05783 430 aaKnown RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CTAGE8P0CG41 777 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 EEF2P13639 858 aaKnown RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 HNRNPH3P31942 346 aaKnown RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 FCGRTP55899 365 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 FKBP3Q00688 224 aaKnown RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 ZNF252P-AS1Q0IIN9 211 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 COASYQ13057 564 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 IKQ13123 557 aaPredicted RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 IKZF1Q13422 519 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 KCNMB1Q16558 191 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 MLANAQ16655 118 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 UBE2SQ16763 222 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 EDRF1Q3B7T1 1238 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 Q4G0T1 1027 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CCDC40Q4G0X9 1142 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 FAM26FQ5R3K3 315 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 SYDE2Q5VT97 1194 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CCDC70Q6NSX1 233 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 BTNL9Q6UXG8 535 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 KCTD1Q719H9 257 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 RSRC2Q7L4I2 434 aaKnown RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CTAGE6Q86UF2 777 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 KIAA0825Q8IV33 1275 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CTAGE4Q8IX94 777 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 SLC35F6Q8N357 371 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 ACRBPQ8NEB7 543 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 GPBAR1Q8TDU6 330 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 JAKMIP2Q96AA8 810 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 ALKBH8Q96BT7 664 aaKnown RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CCDC42Q96M95 316 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 MBOAT7Q96N66 472 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CITED4Q96RK1 184 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CSRNP1Q96S65 589 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 EIF3CQ99613 913 aaKnown RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 SLF1Q9BQI6 1058 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 ANO3Q9BYT9 981 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 NIF3L1Q9GZT8 377 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 ACBD3Q9H3P7 528 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 NDST4Q9H3R1 872 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 DEF6Q9H4E7 631 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 SH2D4AQ9H788 454 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 DBNDD1Q9H9R9 158 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 ARFGAP3Q9NP61 516 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 SLC39A2Q9NP94 309 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 TMEM39AQ9NV64 488 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 PANK4Q9NVE7 773 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 CACNA2D2Q9NY47 1150 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 FAM184BQ9ULE4 1060 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 RABGAP1Q9Y3P9 1069 aa4.46□□□□□ -1.7
PTPN12-208ENST00000447995 GREB1LQ9C091 1923 aaPredicted RBP4.46□□□□□ -1.7
PTPN12-208ENST00000447995 MYH8P13535 1937 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 F5H6K3 240 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 IGF2BP3O00425 579 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 TRAF5O00463 557 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 CETN3O15182 167 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 CALUO43852 315 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 AKR1B10O60218 316 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 PPP1R11O60927 126 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 TBCAO75347 108 aaKnown RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 TACC1O75410 805 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms