RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RIPK3Q9Y572 518 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 ST14Q9Y5Y6 855 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 AK5Q9Y6K8 562 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 CAPN6Q9Y6Q1 641 aa6.07□□□□□ -1.44
SDCBP-205ENST00000447267 UBR5O95071 2799 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-205ENST00000447267 ARID1BQ8NFD5 2236 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-205ENST00000447267 SPTAN1Q13813 2472 aaKnown RBP6.06□□□□□ -1.44
SDCBP-205ENST00000447267 FANCMQ8IYD8 2048 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 ANKRD33BA6NCL7 494 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 ZNF503-AS2A6NEH8 195 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 CTSHP09668 335 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 IFIT1P09914 478 aaKnown RBP6.06□□□□□ -1.44
SDCBP-205ENST00000447267 TFE3P19532 575 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-205ENST00000447267 FGFR2P21802 821 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 EIF4BP23588 611 aaKnown RBP6.06□□□□□ -1.44
SDCBP-205ENST00000447267 GUCY1A2P33402 732 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 CLCN7P51798 805 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 ERVFC1P60507 584 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 FGD1P98174 961 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 MECOMQ03112 1051 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 SCAPQ12770 1279 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 SRSF5Q13243 272 aaKnown RBP6.06□□□□□ -1.44
SDCBP-205ENST00000447267 TMEM184AQ6ZMB5 413 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 AGMOQ6ZNB7 445 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 C22orf34Q6ZV56 151 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 G2E3Q7L622 706 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 HDXQ7Z353 690 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 METTL16Q86W50 562 aaKnown RBP6.06□□□□□ -1.44
SDCBP-205ENST00000447267 MAPKAPK5Q8IW41 473 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 MAGEB6Q8N7X4 407 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 VGLL2Q8N8G2 317 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 KCT2Q8NC54 265 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 ST13P5Q8NFI4 369 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-205ENST00000447267 PJA1Q8NG27 643 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 SH3RF3Q8TEJ3 882 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-205ENST00000447267 ADAM7Q9H2U9 754 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 DBR1Q9UK59 544 aaKnown RBP6.06□□□□□ -1.44
SDCBP-205ENST00000447267 NEUROG3Q9Y4Z2 214 aa6.06□□□□□ -1.44
SDCBP-205ENST00000447267 ATG2AQ2TAZ0 1938 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 WDFY3Q8IZQ1 3526 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 BIN1O00499 593 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 MAFO75444 373 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 PARNO95453 639 aaKnown RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 CST3P01034 146 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 LIG3P49916 1009 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 ETF1P62495 437 aaKnown RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 APOBRQ0VD83 1088 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 MESP2Q0VG99 397 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 BTG3Q14201 252 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 SEPT2Q15019 361 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 RARS2Q5T160 578 aaKnown RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 CDKAL1Q5VV42 579 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 CES5AQ6NT32 575 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 TAPT1Q6NXT6 567 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 LETMD1Q6P1Q0 360 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 SLC4A10Q6U841 1118 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 DNAJC14Q6Y2X3 702 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 ATG9AQ7Z3C6 839 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 NPAS4Q8IUM7 802 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 FBXO16Q8IX29 292 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 CELF5Q8N6W0 485 aaKnown RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 TGFBRAP1Q8WUH2 860 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 ASB11Q8WXH4 323 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 FRMD6Q96NE9 622 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 DPH2Q9BQC3 489 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 DHX36Q9H2U1 1008 aaKnown RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 CARS2Q9HA77 564 aaKnown RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 TJP2Q9UDY2 1190 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 RWDD3Q9Y3V2 267 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 PAXBP1Q9Y5B6 917 aa6.05□□□□□ -1.44
SDCBP-205ENST00000447267 MRPL42Q9Y6G3 142 aaKnown RBP6.05□□□□□ -1.44
SDCBP-205ENST00000447267 A0A1B0GTL3 188 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 WASH4PA8MWX3 477 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 VWA5AO00534 786 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 HOXB8P17481 243 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-205ENST00000447267 RPS26P62854 115 aaKnown RBP6.04□□□□□ -1.44
SDCBP-205ENST00000447267 TAGLNQ01995 201 aaKnown RBP6.04□□□□□ -1.44
SDCBP-205ENST00000447267 SIM2Q14190 667 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-205ENST00000447267 ABCB5Q2M3G0 1257 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 TRIM71Q2Q1W2 868 aaKnown RBP6.04□□□□□ -1.44
SDCBP-205ENST00000447267 PLEKHG4Q58EX7 1191 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 IQSEC1Q6DN90 963 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 DCLRE1AQ6PJP8 1040 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-205ENST00000447267 SLC44A3Q8N4M1 653 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 KLHDC4Q8TBB5 520 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 MDM1Q8TC05 714 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 P2RX5Q93086 422 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 NECTIN4Q96NY8 510 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 BCL11AQ9H165 835 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 ARRDC1-AS1Q9H2J1 176 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 ARHGEF3Q9NR81 526 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 ZNF214Q9UL59 606 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-205ENST00000447267 ADAMTS5Q9UNA0 930 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 TLR6Q9Y2C9 796 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 Q9Y3F1 56 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 C2CD3Q4AC94 2353 aa6.04□□□□□ -1.44
SDCBP-205ENST00000447267 NOTCH2Q04721 2471 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms