RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 SSH1Q8WYL5 1049 aa5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 JADE3Q92613 823 aa5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 TFAP2CQ92754 450 aa5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 GPATCH3Q96I76 525 aa5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 FAXDC2Q96IV6 333 aa5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 SMAD5Q99717 465 aaKnown RBP5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 SCAND2PQ9GZW5 306 aaPredicted RBP5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 LDAHQ9H6V9 325 aa5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 EIF2B4Q9UI10 523 aaKnown RBP5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 HS3ST3A1Q9Y663 406 aa5.88□□□□□ -1.47
AC003001.1-201ENST00000443247 SHTN1A0MZ66 631 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 FAM171A2A8MVW0 826 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 GRXCR1A8MXD5 290 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 NDUFS2O75306 463 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 RBP3P10745 1247 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 ALOX15P16050 662 aaPredicted RBP5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 APOBEC3AP31941 199 aaPredicted RBP5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 CSRP2Q16527 193 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 FAM47AQ5JRC9 791 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 OR10H5Q8NGA6 315 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 OR2I1PQ8NGU4 316 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 SLC35B2Q8TB61 432 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 NRG4Q8WWG1 115 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 DPF2Q92785 391 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 FUBP3Q96I24 572 aaKnown RBP eCLIP5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 SORCS2Q96PQ0 1159 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 NDC1Q9BTX1 674 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 SENP6Q9GZR1 1112 aaPredicted RBP5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 KCNH6Q9H252 994 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 SLC2A4RGQ9NR83 387 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 LANCL2Q9NS86 450 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 TUBD1Q9UJT1 453 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 CLCA2Q9UQC9 943 aa5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 REXO2Q9Y3B8 237 aaKnown RBP5.87□□□□□ -1.47
AC003001.1-201ENST00000443247 WASHC2CQ9Y4E1 1318 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 KLHL33A6NCF5 533 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 TBKBP1A7MCY6 615 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 CXorf49A8MYA2 514 aaPredicted RBP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 FZD9O00144 591 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 NARSO43776 548 aaKnown RBP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 PCDHGA12O60330 932 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 RPS6KA4O75676 772 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 SCAF4O95104 1147 aaKnown RBP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 RAP2AP10114 183 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 C5AR1P21730 350 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 IBSPP21815 317 aaPredicted RBP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 SLC6A9P48067 706 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 PTTG1IPP53801 180 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 PCBP2Q15366 365 aaKnown RBP eCLIP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 BMT2Q1RMZ1 405 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 FNDC7Q5VTL7 733 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 EFCAB12Q6NXP0 572 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 SYT12Q8IV01 421 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 CPT1CQ8TCG5 803 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 ZNF483Q8TF39 744 aaPredicted RBP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 STON2Q8WXE9 905 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 FAM193BQ96PV7 902 aaPredicted RBP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 POGKQ9P215 609 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 AJAP1Q9UKB5 411 aaPredicted RBP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 SIK3Q9Y2K2 1263 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 PCDHGA9Q9Y5G4 932 aaKnown RBP5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 PCDHGA8Q9Y5G5 932 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 PCDHGA7Q9Y5G6 932 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 PCDHGA6Q9Y5G7 932 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 PCDHGA3Q9Y5H0 932 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 MRFAP1Q9Y605 127 aa5.86□□□□□ -1.47
AC003001.1-201ENST00000443247 ATRNL1Q5VV63 1379 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 LEFTY2O00292 366 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 TRIM24O15164 1050 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 RECQL4O94761 1208 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 SNRPA1P09661 255 aaKnown RBP5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 IL2RBP14784 551 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 FPR1P21462 350 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 GUCY1A2P33402 732 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 ALDH1A3P47895 512 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 RAP2BP61225 183 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 ABHD18Q0P651 414 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 SP140Q13342 867 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 PTPN21Q16825 1174 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 AFMIDQ63HM1 303 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 DRICH1Q6PGQ1 229 aaPredicted RBP5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 PNMA8AQ86V59 439 aaPredicted RBP5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 ZFPM1Q8IX07 1006 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 ZNF276Q8N554 614 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 ZFP28Q8NHY6 868 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 SLC25A43Q8WUT9 341 aaPredicted RBP5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 TEKT5Q96M29 485 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 ASPSCR1Q9BZE9 553 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 BRINP2Q9C0B6 783 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 MMRN2Q9H8L6 949 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 HOMER2Q9NSB8 354 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 TMEM140Q9NV12 185 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 INTUQ9ULD6 942 aa5.85□□□□□ -1.47
AC003001.1-201ENST00000443247 TNKSO95271 1327 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 PJA2O43164 708 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 SUV39H1O43463 412 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 GPR32O75388 356 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 PEX11BO96011 259 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms