RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 YARSP54577 528 aaKnown RBP21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 STRN3Q13033 797 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 CUL4AQ13619 759 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 HSP90AA2PQ14568 343 aaPredicted RBP21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 HYIQ5T013 277 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 FUT10Q6P4F1 479 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 C1orf186Q6ZWK4 172 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 C12orf76Q8N812 135 aaPredicted RBP21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 GSTCDQ8NEC7 633 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 RABGGTAQ92696 567 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 FBXL18Q96ME1 805 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 PNMA5Q96PV4 448 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 TCHPQ9BT92 498 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 DAXXQ9UER7 740 aaPredicted RBP21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 KCNG1Q9UIX4 513 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 RBM19Q9Y4C8 960 aaKnown RBP21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 SF3B1O75533 1304 aaKnown RBP eCLIP21.81■■□□□ 1.081e-8■■■■■ 103.4
SHROOM1-204ENST00000440118 F8W810 466 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 SLC16A4O15374 487 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 WEE2P0C1S8 567 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 PLA2G4BP0C869 781 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 GUCY2CP25092 1073 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 SF3A1Q15459 793 aaKnown RBP21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 USP41Q3LFD5 358 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 ATAT1Q5SQI0 421 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 NT5DC1Q5TFE4 455 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 DAW1Q8N136 415 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 HASPINQ8TF76 798 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 SLC22A17Q8WUG5 538 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 CCDC94Q9BW85 323 aaPredicted RBP21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 C11orf16Q9NQ32 467 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 KCND2Q9NZV8 630 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 RAPGEFL1Q9UHV5 662 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 CDH22Q9UJ99 828 aa21.81■■□□□ 1.08
SHROOM1-204ENST00000440118 SFI1A8K8P3 1242 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 PRR33A8MZF0 331 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 GLUD1P00367 558 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 KRT18P05783 430 aaKnown RBP21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 HARSP12081 509 aaKnown RBP21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 CLCN4P51793 760 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 CREMQ03060 361 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 DHX8Q14562 1220 aaKnown RBP21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 TMEM119Q4V9L6 283 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 HERC4Q5GLZ8 1057 aaPredicted RBP21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 TMC5Q6UXY8 1006 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 SYT2Q8N9I0 419 aaPredicted RBP21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 B3GALT6Q96L58 329 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 TMEM134Q9H6X4 195 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 TOPORSQ9NS56 1045 aaPredicted RBP21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 FOXD4L1Q9NU39 408 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 ARHGAP28Q9P2N2 729 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 CACNG4Q9UBN1 327 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 DPP7Q9UHL4 492 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 TNFSF13BQ9Y275 285 aa21.8■■□□□ 1.08
SHROOM1-204ENST00000440118 C2orf16Q68DN1 1984 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 PTGESO14684 152 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 SLC26A4O43511 780 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 PLS3P13797 630 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 LONP1P36776 959 aaKnown RBP21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 MATR3P43243 847 aaKnown RBP eCLIP21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 OSTNP61366 133 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 MAPK7Q13164 816 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 GLRA4Q5JXX5 417 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 TAS1R1Q7RTX1 841 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 RIN2Q8WYP3 895 aaPredicted RBP21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 POMKQ9H5K3 350 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 MAN1C1Q9NR34 630 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 ANKFY1Q9P2R3 1169 aa21.79■■□□□ 1.08
SHROOM1-204ENST00000440118 TEX28O15482 410 aa21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 SLC12A3P55017 1021 aa21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 DSG1Q02413 1049 aa21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 CACNB1Q02641 598 aaPredicted RBP21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 GPBP1Q86WP2 473 aa21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 GLYCTKQ8IVS8 523 aa21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 BICD1Q96G01 975 aa21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 ACO2Q99798 780 aaKnown RBP21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 TARS2Q9BW92 718 aaKnown RBP21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 GPR62Q9BZJ7 368 aa21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 CDT1Q9H211 546 aa21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 LARSQ9P2J5 1176 aaKnown RBP21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 MTCL1Q9Y4B5 1905 aaKnown RBP21.78■■□□□ 1.08
SHROOM1-204ENST00000440118 DENND4AQ7Z401 1863 aa21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 H0YCG3 227 aa21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 K7ELQ4 463 aaPredicted RBP21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 KIF4AO95239 1232 aa21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 ELAVL2Q12926 359 aaKnown RBP21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 KIAA0319Q5VV43 1072 aa21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 KANK3Q6NY19 840 aa21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 CEP57Q86XR8 500 aa21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 RNF168Q8IYW5 571 aaPredicted RBP21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 TDRD5Q8NAT2 981 aaKnown RBP21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 SPIRE2Q8WWL2 714 aa21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 PAAF1Q9BRP4 392 aa21.77■■□□□ 1.08
SHROOM1-204ENST00000440118 MYH15Q9Y2K3 1946 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 NPHP3-ACAD11A0A0J9YXS1 232 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 LILRB3O75022 631 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 TBCAO75347 108 aaKnown RBP21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 FAM13AO94988 1023 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 MYBP10242 640 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms