RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 KLRC1P26715 233 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 RWDD2BP57060 319 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 GRK7Q8WTQ7 553 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 PI4K2AQ9BTU6 479 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 STIM2Q9P246 746 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 DBR1Q9UK59 544 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 MIF4GDA9UHW6 222 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 SPATA31C1P0DKV0 1188 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 HSPA6P17066 643 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 SSTR3P32745 418 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 PLTPP55058 493 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 PPATQ06203 517 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 C1orf186Q6ZWK4 172 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 TAB3Q8N5C8 712 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 PROCA1Q8NCQ7 364 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 OR6B3Q8NGW1 331 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 ZNF564Q8TBZ8 553 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 GLI3P10071 1580 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 PLCH1Q4KWH8 1693 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 FRMPD4Q14CM0 1322 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 SYNJ2BP-COX16A0A087WUM0 186 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 RCCD1A6NED2 376 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 GNAT1P11488 350 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 GTF2A2P52657 109 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 SNRPFP62306 86 aaKnown RBP12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 NAB2Q15742 525 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 ANKS4BQ8N8V4 417 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 HSD17B14Q9BPX1 270 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 NUP85Q9BW27 656 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 GCOM2Q9BZD3 368 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 TMEM8AQ9HCN3 771 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 COX16Q9P0S2 106 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 ARHGAP20Q9P2F6 1191 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 HPCAL4Q9UM19 191 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 LRRD1A4D1F6 860 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 PLA2G6O60733 806 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 EGFRP00533 1210 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 NCOA4Q13772 614 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 TMEM132BQ14DG7 1078 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 SEZ6Q53EL9 994 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 MICAL1Q8TDZ2 1067 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 SYN2Q92777 582 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 CYP39A1Q9NYL5 469 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 SCINQ9Y6U3 715 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 CCDC188H7C350 402 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 PDE2AO00408 941 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 MAGEB2O15479 319 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 ATP9AO75110 1047 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 HLA-DRAP01903 254 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 ZBTB16Q05516 673 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 LAMC2Q13753 1193 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 CAPN12Q6ZSI9 719 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 CEP128Q6ZU80 1094 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 SPATA4Q8NEY3 305 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 SLC30A5Q8TAD4 765 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 C7orf43Q8WVR3 580 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 SAMD15Q9P1V8 674 aa12.36□□□□□ -0.43
TRAPPC9-202ENST00000438773 DUOX1Q9NRD9 1551 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 AKAP11Q9UKA4 1901 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 ALDH5A1P51649 535 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 APBA1Q02410 837 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 IFRD2Q12894 506 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 LY6KQ17RY6 165 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 TRAPPC11Q7Z392 1133 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 PRPF31Q8WWY3 499 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 SMARCAL1Q9NZC9 954 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 UBIAD1Q9Y5Z9 338 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 ATRNL1Q5VV63 1379 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 KRT1P04264 644 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 PTGER2P43116 358 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 CLCN3P51790 818 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 TMEM62Q0P6H9 643 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 METTL7BQ6UX53 244 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 CALN1Q9BXU9 219 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 MED4Q9NPJ6 270 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 NFU1Q9UMS0 254 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 MYH3P11055 1940 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 XIRP1Q702N8 1843 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 FOXN3O00409 490 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 P4HA2O15460 535 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 TGFB3P10600 412 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 CYP2C8P10632 490 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 ATF2P15336 505 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 ANXA13P27216 316 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 MAGEA9P43362 315 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 RRP1BQ14684 758 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 DDX47Q9H0S4 455 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 GOLPH3Q9H4A6 298 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 EFCC1Q9HA90 598 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 PLCB1Q9NQ66 1216 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 FAM114A2Q9NRY5 505 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 TXNDC16Q9P2K2 825 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 NAGPAQ9UK23 515 aa12.35□□□□□ -0.43
TRAPPC9-202ENST00000438773 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 EXTL3O43909 919 aa12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-202ENST00000438773 AP3M2P53677 418 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms