RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 RECQL4O94761 1208 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 CDC25AP30304 524 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 PLA2G5P39877 138 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 NPTX2P47972 431 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 PEX3P56589 373 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 HYIQ5T013 277 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 FUT10Q6P4F1 479 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 CYP26C1Q6V0L0 522 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 C15orf39Q6ZRI6 1047 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 TRIM67Q6ZTA4 783 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 C1orf186Q6ZWK4 172 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 TAS1R1Q7RTX1 841 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 BRAPQ7Z569 592 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 PLCD3Q8N3E9 789 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 C12orf76Q8N812 135 aaPredicted RBP19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 AK8Q96MA6 479 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 MMTAG2Q9BU76 263 aaKnown RBP19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 KIFC3Q9BVG8 833 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 RXFP1Q9HBX9 757 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 POLD4Q9HCU8 107 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 KMT5AQ9NQR1 393 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 TNFSF13BQ9Y275 285 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 USTQ9Y2C2 406 aa19.3■□□□□ 0.68
SBDSP1-203ENST00000437201 TEX28O15482 410 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 GLUD1P00367 558 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 PDCP20941 246 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 GUCY2CP25092 1073 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 SMTNP53814 917 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 ELAVL2Q12926 359 aaKnown RBP19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 PTPN21Q16825 1174 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 NT5DC1Q5TFE4 455 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 TMC5Q6UXY8 1006 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 BMP8AQ7Z5Y6 402 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 GPR149Q86SP6 731 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 HDAC7Q8WUI4 952 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 MRPL4Q9BYD3 311 aaKnown RBP19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 KCNH6Q9H252 994 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 TOPORSQ9NS56 1045 aaPredicted RBP19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 FNIP2Q9P278 1114 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 GDAQ9Y2T3 454 aa19.29■□□□□ 0.68
SBDSP1-203ENST00000437201 TMEM221A6NGB7 291 aa19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 M0R296 226 aa19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 YARSP54577 528 aaKnown RBP19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 SIGLEC14Q08ET2 396 aa19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 EEF1DP3Q658K8 133 aa19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 HFE2Q6ZVN8 426 aa19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 SYT2Q8N9I0 419 aaPredicted RBP19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 TDRD5Q8NAT2 981 aaKnown RBP19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 CMASQ8NFW8 434 aaPredicted RBP19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 ACSF2Q96CM8 615 aaPredicted RBP19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 NTPCRQ9BSD7 190 aaKnown RBP19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 RUSC1Q9BVN2 902 aa19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 CCDC94Q9BW85 323 aaPredicted RBP19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 GPR62Q9BZJ7 368 aa19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 PLEKHA4Q9H4M7 779 aa19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 ARHGAP28Q9P2N2 729 aa19.28■□□□□ 0.68
SBDSP1-203ENST00000437201 TDRD15B5MCY1 1934 aaKnown RBP19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 PTGESO14684 152 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 WEE2P0C1S8 567 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 SP100P23497 879 aaPredicted RBP19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 UBA7P41226 1012 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 STRN3Q13033 797 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 PDXDC1Q6P996 788 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 OTOP3Q7RTS5 596 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 ZDHHC14Q8IZN3 488 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 SPIRE2Q8WWL2 714 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 RIN2Q8WYP3 895 aaPredicted RBP19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 CALML4Q96GE6 196 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 ACO2Q99798 780 aaKnown RBP19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 TCHPQ9BT92 498 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 RHOBTB2Q9BYZ6 727 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 MAN1C1Q9NR34 630 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 USP20Q9Y2K6 914 aa19.27■□□□□ 0.68
SBDSP1-203ENST00000437201 CASTOR2A6NHX0 329 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 C2CD4DB7Z1M9 353 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 F8W810 466 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 H0YCG3 227 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 EDN1P05305 212 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 PLS3P13797 630 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 CUL4AQ13619 759 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 ZNF568Q3ZCX4 644 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 CCDC149Q6ZUS6 474 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 KCNK18Q7Z418 384 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 UBALD2Q8IYN6 164 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 DAW1Q8N136 415 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 PBXIP1Q96AQ6 731 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 UROC1Q96N76 676 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 TTPALQ9BTX7 342 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 CDH22Q9UJ99 828 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 SORCS3Q9UPU3 1222 aa19.26■□□□□ 0.67
SBDSP1-203ENST00000437201 PLA2G4BP0C869 781 aa19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 SCP2P22307 547 aa19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 LONP1P36776 959 aaKnown RBP19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 GRM5P41594 1212 aa19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 MAPK7Q13164 816 aa19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 MTMR3Q13615 1198 aa19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 KANK3Q6NY19 840 aa19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 SUGP1Q8IWZ8 645 aaKnown RBP19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 STAMQ92783 540 aa19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 PNMA5Q96PV4 448 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms