RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 RUBCNQ92622 972 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 FGF14Q92915 247 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 GJB4Q9NTQ9 266 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 CDH7Q9ULB5 785 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 POLIQ9UNA4 740 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 ZFP37Q9Y6Q3 630 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 GVINP1Q7Z2Y8 2422 aa12.88□□□□□ -0.35
CHRNA1-207ENST00000435083 DTNBO60941 627 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 GLULP15104 373 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 XBP1P17861 261 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 ARL2P36404 184 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 STARD6P59095 220 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 SPIRE1Q08AE8 756 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 SNW1Q13573 536 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 HSP90AA2PQ14568 343 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 RTP2Q5QGT7 225 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 LIN9Q5TKA1 542 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 SLFN12Q8IYM2 578 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 HASPINQ8TF76 798 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 CCDC43Q96MW1 224 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 EIF2AK1Q9BQI3 630 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 PAAF1Q9BRP4 392 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 SF3B1O75533 1304 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 MYH15Q9Y2K3 1946 aa12.87□□□□□ -0.35
CHRNA1-207ENST00000435083 DOCK6Q96HP0 2047 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 DGAT1O75907 488 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 GLRA2P23416 452 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 PPM1LQ5SGD2 360 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 FAM171A1Q5VUB5 890 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 CLSTN3Q9BQT9 956 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 TTPALQ9BTX7 342 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 ANKEF1Q9NU02 776 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 SPATA6Q9NWH7 488 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 FBXW11Q9UKB1 542 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 A0A087WWV3 80 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 A0A1B0GUA9 196 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 KANSL1LA0AUZ9 987 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 CASTOR2A6NHX0 329 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 CCL16O15467 120 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 LAMTOR5O43504 91 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 CDKL5O76039 1030 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 C8AP07357 584 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 TUSC3Q13454 348 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 UBXN2BQ14CS0 331 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 PSMD5Q16401 504 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 MAEAQ7L5Y9 396 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 PIK3R5Q8WYR1 880 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 FGF13Q92913 245 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 NFKBIZQ9BYH8 718 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 BCO2Q9BYV7 579 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 POLR3FQ9H1D9 316 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 PDRG1Q9NUG6 133 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 PCDHA12Q9UN75 941 aa12.86□□□□□ -0.35
CHRNA1-207ENST00000435083 FANCMQ8IYD8 2048 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 EP300Q09472 2414 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 FAM205CA6NFA0 338 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 LRRIQ4A6NIV6 560 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 XYLBO75191 536 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 KIF4AO95239 1232 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 LYPLA2O95372 231 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 MLF2Q15773 248 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 TMEM132AQ24JP5 1023 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 SLC44A4Q53GD3 710 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 MTSS1LQ765P7 747 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 MAML2Q8IZL2 1156 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 SUMF1Q8NBK3 374 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 ITFG1Q8TB96 612 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 LNX1Q8TBB1 728 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 PIGOQ8TEQ8 1089 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 HSD17B14Q9BPX1 270 aa12.85□□□□□ -0.35
CHRNA1-207ENST00000435083 VPS13AQ96RL7 3174 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 ZMYM2Q9UBW7 1377 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 COL4A3Q01955 1670 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 FAM170BA6NMN3 283 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 ADAM12O43184 909 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 CD72P21854 359 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 RARRES1P49788 294 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 PRKCQQ04759 706 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 CSTF1Q05048 431 aaKnown RBP12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 SCRN1Q12765 414 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 SLC7A14Q8TBB6 771 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 KXD1Q9BQD3 176 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 TM6SF1Q9BZW5 370 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 SNTG2Q9NY99 539 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 NCDNQ9UBB6 729 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 MTF2Q9Y483 593 aaPredicted RBP12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 STK36Q9NRP7 1315 aa12.84□□□□□ -0.35
CHRNA1-207ENST00000435083 CACNA1IQ9P0X4 2223 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 THP07101 528 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 HOXA9P31269 272 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 TXKP42681 527 aa12.83□□□□□ -0.36
CHRNA1-207ENST00000435083 NR5A1Q13285 461 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms