RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 TTC3P53804 2025 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 KCNJ18B7U540 433 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 CLTAP09496 248 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 ZNF18P17022 549 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 SPAG1Q07617 926 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 PPIGQ13427 754 aaKnown RBP eCLIP25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 KCNJ12Q14500 433 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 SEZ6Q53EL9 994 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 ZBTB41Q5SVQ8 909 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 CRELD2Q6UXH1 353 aaPredicted RBP25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 IRF2BP1Q8IU81 584 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 LINC01599Q8WXQ3 324 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 TSPYL2Q9H2G4 693 aaPredicted RBP25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 NXF3Q9H4D5 531 aaKnown RBP25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 CPSF3Q9UKF6 684 aaKnown RBP25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 IPPQ9Y573 584 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 PCDHB2Q9Y5E7 798 aa25.26■■□□□ 1.63
SMARCAL1-208ENST00000434435 ADRB2P07550 413 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 STAG3L1P0CL83 205 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 KRT13P13646 458 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 CDK11BP21127 795 aaKnown RBP25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 EEF1GP26641 437 aaKnown RBP25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 TNFSF9P41273 254 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 MARSP56192 900 aaKnown RBP25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 OSTNP61366 133 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 FRMD5Q7Z6J6 570 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 CREBRFQ8IUR6 639 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 BRSK2Q8IWQ3 736 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 ANKRD20A12PQ8NF67 263 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 BADQ92934 168 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 RPF1Q9H9Y2 349 aaKnown RBP25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 IL23AQ9NPF7 189 aa25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 RBAKQ9NYW8 714 aaPredicted RBP25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 ARMCX3Q9UH62 379 aaPredicted RBP25.25■■□□□ 1.63
SMARCAL1-208ENST00000434435 A0A0U1RQF3 1178 aa25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 SYN1P17600 705 aa25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 MTIF2P46199 727 aaKnown RBP25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 POU5F1Q01860 360 aaKnown RBP25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 FPGSQ05932 587 aa25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 CYP24A1Q07973 514 aa25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 TCP11X2Q5H9J9 407 aa25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 INTS8Q75QN2 995 aaKnown RBP25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 SMG8Q8ND04 991 aaKnown RBP25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 ACAP3Q96P50 834 aa25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 SNTG2Q9NY99 539 aa25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 ZMYND8Q9ULU4 1186 aaPredicted RBP25.24■■□□□ 1.63
SMARCAL1-208ENST00000434435 C9IYK1 514 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 ZNF623O75123 536 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 YARSP54577 528 aaKnown RBP25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 IKBKEQ14164 716 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 TCTN1Q2MV58 587 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 SLC24A5Q71RS6 500 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 RTN4RL1Q86UN2 441 aaPredicted RBP25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 TMEM192Q8IY95 271 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 VWCEQ96DN2 955 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 MFSD14AQ96MC6 490 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 APOL6Q9BWW8 343 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 HES2Q9Y543 173 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 NR2E3Q9Y5X4 410 aa25.23■■□□□ 1.63
SMARCAL1-208ENST00000434435 PTPRSQ13332 1948 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 RECQL4O94761 1208 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 CXCL8P10145 99 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 ACTN1P12814 892 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 ITGA4P13612 1032 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 BFSP1Q12934 665 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 PSMD6Q15008 389 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 ENOX2Q16206 610 aaKnown RBP25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 MRPL10Q7Z7H8 261 aaKnown RBP25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 USP37Q86T82 979 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 ECHDC2Q86YB7 292 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 PGBD4Q96DM1 585 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 BORCS6Q96GS4 357 aa25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 LBHD1Q9BQE6 289 aaPredicted RBP25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 TOPORSQ9NS56 1045 aaPredicted RBP25.22■■□□□ 1.63
SMARCAL1-208ENST00000434435 ENPP3O14638 875 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 EFCAB14O75071 495 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 IL18RAPO95256 599 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 ATP1A3P13637 1013 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 VAMP7P51809 220 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 ENPEPQ07075 957 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 SURF1Q15526 300 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 UVSSAQ2YD98 709 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 TRIM59Q8IWR1 403 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 TMC2Q8TDI7 906 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 PARP2Q9UGN5 583 aa25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 LIMA1Q9UHB6 759 aaKnown RBP25.21■■□□□ 1.63
SMARCAL1-208ENST00000434435 FNDC1Q4ZHG4 1894 aaPredicted RBP25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 ABHD14A-ACY1A0A1B0GW23 586 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 GOLGA6L3A6NEY3 463 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 TPM2P07951 284 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 ACRP10323 421 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 ATF7P17544 494 aaPredicted RBP25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 IBSPP21815 317 aaPredicted RBP25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 PPP2R3AQ06190 1150 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 KRT31Q15323 416 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 DCAF17Q5H9S7 520 aaPredicted RBP25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 RNF169Q8NCN4 708 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 FAM212AQ96EL1 285 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 SNX27Q96L92 541 aa25.2■■□□□ 1.62
SMARCAL1-208ENST00000434435 FNBP1Q96RU3 617 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms