RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 HOXC10Q9NYD6 342 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 GRIN3BO60391 1043 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 DLATP10515 647 aaKnown RBP18.3■□□□□ 0.52
CTSD-204ENST00000433655 PTENP60484 403 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 LEKR1Q6ZMV7 388 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 CPNE8Q86YQ8 564 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 CEP89Q96ST8 783 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 RUFY1Q96T51 708 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 PI4K2AQ9BTU6 479 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 PPP2R3BQ9Y5P8 575 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 MAFBQ9Y5Q3 323 aaPredicted RBP18.3■□□□□ 0.52
CTSD-204ENST00000433655 SNCAIPQ9Y6H5 919 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 DAPK3O43293 454 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 USP2O75604 605 aaPredicted RBP18.29■□□□□ 0.52
CTSD-204ENST00000433655 CYP1A2P05177 515 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 COPB2P35606 906 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 CDR2Q01850 454 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 PRKG1Q13976 671 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 HLTFQ14527 1009 aaKnown RBP eCLIP18.29■□□□□ 0.52
CTSD-204ENST00000433655 UAP1Q16222 522 aaPredicted RBP18.29■□□□□ 0.52
CTSD-204ENST00000433655 TREML2Q5T2D2 321 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 FOXR1Q6PIV2 292 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 CYFIP1Q7L576 1253 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 NLGN2Q8NFZ4 835 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 ASAP3Q8TDY4 903 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 CD101Q93033 1021 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 ZSWIM1Q9BR11 485 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 HAPLN2Q9GZV7 340 aa18.29■□□□□ 0.52
CTSD-204ENST00000433655 TULP1O00294 542 aaPredicted RBP18.28■□□□□ 0.52
CTSD-204ENST00000433655 CALCAP01258 141 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 FLT3P36888 993 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 PEX5P50542 639 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 CLDN10P78369 228 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 DLK2Q6UY11 383 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 ATP8B4Q8TF62 1192 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 KCNN1Q92952 543 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 BICD1Q96G01 975 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 IFT74Q96LB3 600 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 STYXL1Q9Y6J8 313 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 TMEM110-MUSTN1A8MSY1 372 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 MIF4GDA9UHW6 222 aaKnown RBP18.28■□□□□ 0.52
CTSD-204ENST00000433655 OATP04181 439 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 COMTP21964 271 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 STXBP2Q15833 593 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 MAATS1Q7Z4T9 603 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 ADAT2Q7Z6V5 191 aaKnown RBP18.28■□□□□ 0.52
CTSD-204ENST00000433655 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 CHST13Q8NET6 341 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 DNERQ8NFT8 737 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 CCDC26Q8TAB7 109 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 TMEM143Q96AN5 459 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 RPS6KC1Q96S38 1066 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 TRIM51Q9BSJ1 452 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 DHX33Q9H6R0 707 aaKnown RBP18.28■□□□□ 0.52
CTSD-204ENST00000433655 ZNF302Q9NR11 478 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 TRPC6Q9Y210 931 aa18.28■□□□□ 0.52
CTSD-204ENST00000433655 PTPRJQ12913 1337 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 IGKV6D-21A0A0A0MT36 114 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 EXTL3O43909 919 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 GLRA2P23416 452 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 HSD17B3P37058 310 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 PDE6CP51160 858 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 GCNT1Q02742 428 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 VGLL4Q14135 290 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 MESDQ14696 234 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 SH2D3CQ8N5H7 860 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 BTBD6Q96KE9 485 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 PORCNQ9H237 461 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 BTBD7Q9P203 1132 aa18.27■□□□□ 0.52
CTSD-204ENST00000433655 GRIN2DO15399 1336 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 H0YGN5 161 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 EDN1P05305 212 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 ARL2P36404 184 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 ALDH5A1P51649 535 aaPredicted RBP18.27■□□□□ 0.51
CTSD-204ENST00000433655 POLGP54098 1239 aaPredicted RBP18.27■□□□□ 0.51
CTSD-204ENST00000433655 NLRP11P59045 1033 aaKnown RBP18.27■□□□□ 0.51
CTSD-204ENST00000433655 SKOR1P84550 965 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 PSMD6Q15008 389 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 LMBRD2Q68DH5 695 aaPredicted RBP18.27■□□□□ 0.51
CTSD-204ENST00000433655 CRELD2Q6UXH1 353 aaPredicted RBP18.27■□□□□ 0.51
CTSD-204ENST00000433655 LBX2Q6XYB7 198 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 USP37Q86T82 979 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 ZNF564Q8TBZ8 553 aaPredicted RBP18.27■□□□□ 0.51
CTSD-204ENST00000433655 PSPC1Q8WXF1 523 aaKnown RBP18.27■□□□□ 0.51
CTSD-204ENST00000433655 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 PCYT2Q99447 389 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 NUP85Q9BW27 656 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 GTF3C4Q9UKN8 822 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 PLAAQ9Y263 795 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 NFS1Q9Y697 457 aa18.27■□□□□ 0.51
CTSD-204ENST00000433655 H0YCG3 227 aa18.26■□□□□ 0.51
CTSD-204ENST00000433655 ZC3H11AO75152 810 aaKnown RBP eCLIP18.26■□□□□ 0.513e-7■■■□□ 14.6
CTSD-204ENST00000433655 PIGRP01833 764 aa18.26■□□□□ 0.51
CTSD-204ENST00000433655 LIG4P49917 911 aa18.26■□□□□ 0.51
CTSD-204ENST00000433655 ZNF653Q96CK0 615 aa18.26■□□□□ 0.51
CTSD-204ENST00000433655 NAP1L3Q99457 506 aaPredicted RBP18.26■□□□□ 0.51
CTSD-204ENST00000433655 UBA1P22314 1058 aaKnown RBP18.25■□□□□ 0.51
CTSD-204ENST00000433655 CLEC16AQ2KHT3 1053 aa18.25■□□□□ 0.51
CTSD-204ENST00000433655 ZACNQ401N2 412 aa18.25■□□□□ 0.51
CTSD-204ENST00000433655 KCTD16Q68DU8 428 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms