RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 TUSC3Q13454 348 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 SMAD4Q13485 552 aaKnown RBP10.77□□□□□ -0.69
HDAC6-207ENST00000430858 KCNC3Q14003 757 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 FOXD4L5Q5VV16 416 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-207ENST00000430858 ATL3Q6DD88 541 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 MPZL3Q6UWV2 235 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 ZPBP2Q6X784 338 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 TMEM184AQ6ZMB5 413 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 CCDC73Q6ZRK6 1079 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 HAUS6Q7Z4H7 955 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 MYCT1Q8N699 235 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 FOXD4L4Q8WXT5 416 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-207ENST00000430858 MSLNLQ96KJ4 702 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 TCHPQ9BT92 498 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 CCDC94Q9BW85 323 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-207ENST00000430858 CDT1Q9H211 546 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 MARCH5Q9NX47 278 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 CLEC1BQ9P126 229 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 TFIP11Q9UBB9 837 aaKnown RBP10.77□□□□□ -0.69
HDAC6-207ENST00000430858 GDAQ9Y2T3 454 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 PRG3Q9Y2Y8 225 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-207ENST00000430858 SPTBN5Q9NRC6 3674 aaKnown RBP10.76□□□□□ -0.69
HDAC6-207ENST00000430858 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-207ENST00000430858 PTGESO14684 152 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 MBTPS2O43462 519 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 TRAK2O60296 914 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 TOM1L1O75674 476 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 SOD2P04179 222 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 YARSP54577 528 aaKnown RBP10.76□□□□□ -0.69
HDAC6-207ENST00000430858 SV2BQ7L1I2 683 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 FAM178BQ8IXR5 827 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 SPRYD3Q8NCJ5 442 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 SMRP1Q8NCR6 262 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 VN1R2Q8NFZ6 395 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 KCNG4Q8TDN1 519 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 CASP10Q92851 521 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 NECAB3Q96P71 396 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-207ENST00000430858 HERC2P3Q9BVR0 1158 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 VN1R3Q9BXE9 311 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 EMILIN2Q9BXX0 1053 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 ZHX3Q9H4I2 956 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 MRPL17Q9NRX2 175 aaKnown RBP10.76□□□□□ -0.69
HDAC6-207ENST00000430858 TOPORSQ9NS56 1045 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-207ENST00000430858 PRKAG3Q9UGI9 489 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 CFAP45Q9UL16 551 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 BARX2Q9UMQ3 279 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-207ENST00000430858 SSX2IPQ9Y2D8 614 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 A0A0C4DFX4 3053 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 ATG2AQ2TAZ0 1938 aa10.76□□□□□ -0.69
HDAC6-207ENST00000430858 K7ENM7 598 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 ABLIM1O14639 778 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 CLDN3O15551 220 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 CUTAO60888 179 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 CLASP2O75122 1294 aaKnown RBP10.75□□□□□ -0.69
HDAC6-207ENST00000430858 EFEMP2O95967 443 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 URODP06132 367 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 HOXB8P17481 243 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-207ENST00000430858 STAT6P42226 847 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 MCL1Q07820 350 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 PKP1Q13835 747 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 NOLC1Q14978 699 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC6-207ENST00000430858 PTPN14Q15678 1187 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 SMAD2Q15796 467 aaKnown RBP10.75□□□□□ -0.69
HDAC6-207ENST00000430858 CLUL1Q15846 466 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 XKR4Q5GH76 650 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 FUT10Q6P4F1 479 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 ZBTB33Q86T24 672 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 PPFIBP1Q86W92 1011 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 GPR65Q8IYL9 337 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 RNF168Q8IYW5 571 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-207ENST00000430858 CEP120Q8N960 986 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 AUTS2Q8WXX7 1259 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 DDX12PQ92771 950 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 ACAP3Q96P50 834 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 ANKFY1Q9P2R3 1169 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 ADAM28Q9UKQ2 775 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 TBX20Q9UMR3 447 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 HCFC2Q9Y5Z7 792 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 BRWD1Q9NSI6 2320 aa10.75□□□□□ -0.69
HDAC6-207ENST00000430858 CASTOR2A6NHX0 329 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 MYMKA6NI61 221 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 LILRB3O75022 631 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 TADA2AO75478 443 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 PIGRP01833 764 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 MATR3P43243 847 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC6-207ENST00000430858 GLUD2P49448 558 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 LIG4P49917 911 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 OSTNP61366 133 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 RBM10P98175 930 aaKnown RBP10.74□□□□□ -0.69
HDAC6-207ENST00000430858 GTF2BQ00403 316 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 HSP90AA2PQ14568 343 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-207ENST00000430858 NAB2Q15742 525 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 FOXD4L6Q3SYB3 417 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-207ENST00000430858 TPRNQ4KMQ1 711 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 KIAA1841Q6NSI8 718 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 ANKRD54Q6NXT1 300 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 LLGL2Q6P1M3 1020 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 ALKAL1Q6UXT8 129 aa10.74□□□□□ -0.69
HDAC6-207ENST00000430858 FOXD4L3Q6VB84 417 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms