RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SETD3Q86TU7 594 aaPredicted RBP17.32■□□□□ 0.36
RIF1-204ENST00000430328 OR6B3Q8NGW1 331 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 HEMGNQ9BXL5 484 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 FOXP2O15409 715 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 ACADSP16219 412 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 VHLP40337 213 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 MAML3Q96JK9 1138 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 ING3Q9NXR8 418 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 HIST1H2AGP0C0S8 130 aaPredicted RBP17.32■□□□□ 0.36
RIF1-204ENST00000430328 HIST1H2ADP20671 130 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 CRYMQ14894 314 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 VSTM4Q8IW00 320 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 TSPAN17Q96FV3 270 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 HIST1H2AHQ96KK5 128 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 HIST1H2AJQ99878 128 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 H2AFJQ9BTM1 129 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 ZCWPW1Q9H0M4 648 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 ADAMTS1Q9UHI8 967 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 USP15Q9Y4E8 981 aaPredicted RBP17.32■□□□□ 0.36
RIF1-204ENST00000430328 GRID2IPA4D2P6 1211 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 GGPS1O95749 300 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 ATAD3AQ9NVI7 634 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 S100A1P23297 94 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 FEN1P39748 380 aaKnown RBP17.32■□□□□ 0.36
RIF1-204ENST00000430328 OSTNP61366 133 aa17.32■□□□□ 0.36
RIF1-204ENST00000430328 CTCFP49711 727 aaPredicted RBP17.31■□□□□ 0.36
RIF1-204ENST00000430328 MRPS25P82663 173 aaKnown RBP17.31■□□□□ 0.36
RIF1-204ENST00000430328 ELMO2Q96JJ3 720 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 ECSITQ9BQ95 431 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 UBA2Q9UBT2 640 aaPredicted RBP17.31■□□□□ 0.36
RIF1-204ENST00000430328 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 ACEP12821 1306 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 TAF5LO75529 589 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 IL2RBP14784 551 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 TCN1P20061 433 aaPredicted RBP17.31■□□□□ 0.36
RIF1-204ENST00000430328 LRRC41Q15345 812 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 MAP3K1Q13233 1512 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 USP17L12C9JPN9 530 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 USP17L21D6R901 530 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 SOAT1P35610 550 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 CYP27A1Q02318 531 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 ARHGEF6Q15052 776 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 UBASH3BQ8TF42 649 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 CNOT8Q9UFF9 292 aaKnown RBP17.31■□□□□ 0.36
RIF1-204ENST00000430328 FAM25AB3EWG3 89 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 FAM25CB3EWG5 89 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 FAM25GB3EWG6 89 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 NDST4Q9H3R1 872 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 CCND2P30279 289 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 RUBCNQ92622 972 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 FAM153AQ9UHL3 310 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 VAMP4O75379 141 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 RRM2P31350 389 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 STAT4Q14765 748 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 PKN2Q16513 984 aaKnown RBP17.31■□□□□ 0.36
RIF1-204ENST00000430328 ENKURQ8TC29 256 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 RBBP8Q99708 897 aa17.31■□□□□ 0.36
RIF1-204ENST00000430328 K7ERI5 159 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 RAD51Q06609 339 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 CC2D1AQ6P1N0 951 aaPredicted RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 C10orf53Q8N6V4 93 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 OSBPL6Q9BZF3 934 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 PURAQ00577 322 aaKnown RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 CTNNAL1Q9UBT7 734 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 MTMR6Q9Y217 621 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 MYBL1P10243 752 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 MAGEA10P43363 369 aaPredicted RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 STX4Q12846 297 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 WNT8AQ9H1J5 351 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 DDX56Q9NY93 547 aaKnown RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 ABCB1P08183 1280 aaPredicted RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 PLA2G4AP47712 749 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 KCNQ4P56696 695 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 GTF2H3Q13889 308 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 SULF1Q8IWU6 871 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 EMILIN3Q9NT22 766 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 ZAP70P43403 619 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 DGKHQ86XP1 1220 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 TRIM51Q9BSJ1 452 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 VAV3Q9UKW4 847 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 ZNF862O60290 1169 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 EIF2B5Q13144 721 aaKnown RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 NCAPHQ15003 741 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 ZSWIM7Q19AV6 140 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 LRRC24Q50LG9 513 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 SNX30Q5VWJ9 437 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 PCDHB8Q9UN66 801 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 TNNQ9UQP3 1299 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 FAM187AA6NFU0 413 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 LDHAP00338 332 aaKnown RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 POTEIP0CG38 1075 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 ADD1P35611 737 aaKnown RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 SARSP49591 514 aaKnown RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 NDUFAF6Q330K2 333 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 IZUMO1Q8IYV9 350 aa17.3■□□□□ 0.36
RIF1-204ENST00000430328 XPO6Q96QU8 1125 aaKnown RBP17.3■□□□□ 0.36
RIF1-204ENST00000430328 SPATA16Q9BXB7 569 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms