RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 C1orf186Q6ZWK4 172 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 PPFIBP1Q86W92 1011 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 HASPINQ8TF76 798 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 DRC1Q96MC2 740 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 FBXL18Q96ME1 805 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 GPR62Q9BZJ7 368 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 HCN4Q9Y3Q4 1203 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 VPS37CA5D8V6 355 aaPredicted RBP20.25■□□□□ 0.83
PSPC1-202ENST00000427943 MTHFRP42898 656 aa20.25■□□□□ 0.83
PSPC1-202ENST00000427943 DMP1Q13316 513 aaPredicted RBP20.25■□□□□ 0.83
PSPC1-202ENST00000427943 TUSC3Q13454 348 aa20.25■□□□□ 0.83
PSPC1-202ENST00000427943 CUL4AQ13619 759 aa20.25■□□□□ 0.83
PSPC1-202ENST00000427943 ARL6IP4Q66PJ3 421 aaKnown RBP20.25■□□□□ 0.83
PSPC1-202ENST00000427943 KIAA1841Q6NSI8 718 aa20.25■□□□□ 0.83
PSPC1-202ENST00000427943 TMC5Q6UXY8 1006 aa20.25■□□□□ 0.83
PSPC1-202ENST00000427943 CDK5RAP3Q96JB5 506 aa20.25■□□□□ 0.83
PSPC1-202ENST00000427943 KMT5AQ9NQR1 393 aa20.25■□□□□ 0.83
PSPC1-202ENST00000427943 ADAM28Q9UKQ2 775 aa20.25■□□□□ 0.83
PSPC1-202ENST00000427943 SFI1A8K8P3 1242 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 TEX28O15482 410 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 MYBP10242 640 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 HSP90AA2PQ14568 343 aaPredicted RBP20.24■□□□□ 0.83
PSPC1-202ENST00000427943 GLRA4Q5JXX5 417 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 KIAA0319Q5VV43 1072 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 TAS1R3Q7RTX0 852 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 CEP120Q8N960 986 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 RIPOR3Q96MK2 946 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 NECTIN4Q96NY8 510 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 NT5C3AQ9H0P0 336 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 SFXN1Q9H9B4 322 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 SSX2IPQ9Y2D8 614 aa20.24■□□□□ 0.83
PSPC1-202ENST00000427943 C2CD4DB7Z1M9 353 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 SLC16A4O15374 487 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 KIF4AO95239 1232 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 THP07101 528 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 ADH1AP07327 375 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 GUCY2CP25092 1073 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 DSG1Q02413 1049 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 CACNB1Q02641 598 aaPredicted RBP20.23■□□□□ 0.83
PSPC1-202ENST00000427943 ZNF568Q3ZCX4 644 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 TMEM119Q4V9L6 283 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 BRAPQ7Z569 592 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 GLYCTKQ8IVS8 523 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 EDAQ92838 391 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 CDT1Q9H211 546 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 MAN1C1Q9NR34 630 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 ARHGAP28Q9P2N2 729 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 TNFSF13BQ9Y275 285 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 NR2E1Q9Y466 385 aa20.23■□□□□ 0.83
PSPC1-202ENST00000427943 TADA2AO75478 443 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 PLA2G4BP0C869 781 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 SLC12A3P55017 1021 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 ZXDAP98168 799 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 GRIN1Q05586 938 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 NAB2Q15742 525 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 USP41Q3LFD5 358 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 ATAT1Q5SQI0 421 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 HFE2Q6ZVN8 426 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 SYT2Q8N9I0 419 aaPredicted RBP20.22■□□□□ 0.83
PSPC1-202ENST00000427943 ACO2Q99798 780 aaKnown RBP20.22■□□□□ 0.83
PSPC1-202ENST00000427943 TARS2Q9BW92 718 aaKnown RBP20.22■□□□□ 0.83
PSPC1-202ENST00000427943 TMEM134Q9H6X4 195 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 CHST7Q9NS84 486 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 SF3B1O75533 1304 aaKnown RBP eCLIP20.22■□□□□ 0.831e-10■■■■■ 241.2
PSPC1-202ENST00000427943 KMT2EQ8IZD2 1858 aa20.22■□□□□ 0.83
PSPC1-202ENST00000427943 NPHP3-ACAD11A0A0J9YXS1 232 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 GLUD1P00367 558 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 RPL17P18621 184 aaKnown RBP20.21■□□□□ 0.83
PSPC1-202ENST00000427943 OSTNP61366 133 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 SF3A1Q15459 793 aaKnown RBP20.21■□□□□ 0.83
PSPC1-202ENST00000427943 PTPN21Q16825 1174 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 APBB1IPQ7Z5R6 666 aaPredicted RBP20.21■□□□□ 0.83
PSPC1-202ENST00000427943 ZBTB33Q86T24 672 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 LRRC15Q8TF66 581 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 RIN2Q8WYP3 895 aaPredicted RBP20.21■□□□□ 0.83
PSPC1-202ENST00000427943 TIPINQ9BVW5 301 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 MRPL4Q9BYD3 311 aaKnown RBP20.21■□□□□ 0.83
PSPC1-202ENST00000427943 BACH2Q9BYV9 841 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 C17orf75Q9HAS0 396 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 RXFP1Q9HBX9 757 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 ZNF318Q5VUA4 2279 aa20.21■□□□□ 0.83
PSPC1-202ENST00000427943 SPATA31D3P0C874 917 aa20.2■□□□□ 0.82
PSPC1-202ENST00000427943 HARSP12081 509 aaKnown RBP20.2■□□□□ 0.82
PSPC1-202ENST00000427943 RTP2Q5QGT7 225 aa20.2■□□□□ 0.82
PSPC1-202ENST00000427943 PRSS55Q6UWB4 352 aaPredicted RBP20.2■□□□□ 0.82
PSPC1-202ENST00000427943 TRIM67Q6ZTA4 783 aa20.2■□□□□ 0.82
PSPC1-202ENST00000427943 SPATA31D4Q6ZUB0 917 aa20.2■□□□□ 0.82
PSPC1-202ENST00000427943 GPR149Q86SP6 731 aa20.2■□□□□ 0.82
PSPC1-202ENST00000427943 PALB2Q86YC2 1186 aa20.2■□□□□ 0.82
PSPC1-202ENST00000427943 TDRD5Q8NAT2 981 aaKnown RBP20.2■□□□□ 0.82
PSPC1-202ENST00000427943 AK8Q96MA6 479 aa20.2■□□□□ 0.82
PSPC1-202ENST00000427943 CCDC94Q9BW85 323 aaPredicted RBP20.2■□□□□ 0.82
PSPC1-202ENST00000427943 GOLGA2P5Q9HBQ8 144 aa20.2■□□□□ 0.82
PSPC1-202ENST00000427943 RBM19Q9Y4C8 960 aaKnown RBP20.2■□□□□ 0.82
PSPC1-202ENST00000427943 DOCK6Q96HP0 2047 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 TMEM221A6NGB7 291 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 M0R296 226 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 PLS3P13797 630 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 UBA7P41226 1012 aa20.19■□□□□ 0.82
PSPC1-202ENST00000427943 GRM5P41594 1212 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms