RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 SMTNP53814 917 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 SLC12A3P55017 1021 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 TUSC3Q13454 348 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 DHX8Q14562 1220 aaKnown RBP20.25■□□□□ 0.83
GPC1-205ENST00000427506 RARS2Q5T160 578 aaKnown RBP20.25■□□□□ 0.83
GPC1-205ENST00000427506 FUT10Q6P4F1 479 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 C12orf76Q8N812 135 aaPredicted RBP20.25■□□□□ 0.83
GPC1-205ENST00000427506 SLC22A17Q8WUG5 538 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 ACO2Q99798 780 aaKnown RBP20.25■□□□□ 0.83
GPC1-205ENST00000427506 TCHPQ9BT92 498 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 LRFN3Q9BTN0 628 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 ADAM7Q9H2U9 754 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 KCND2Q9NZV8 630 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 ARHGAP28Q9P2N2 729 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 ADAM28Q9UKQ2 775 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 TDRD15B5MCY1 1934 aaKnown RBP20.24■□□□□ 0.83
GPC1-205ENST00000427506 CASTOR2A6NHX0 329 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 LOC730098B7Z3J9 87 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 PTGESO14684 152 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 GPR37L1O60883 481 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 PLS3P13797 630 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 CACNB1Q02641 598 aaPredicted RBP20.24■□□□□ 0.83
GPC1-205ENST00000427506 STRN3Q13033 797 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 HSP90AA2PQ14568 343 aaPredicted RBP20.24■□□□□ 0.83
GPC1-205ENST00000427506 ZNF568Q3ZCX4 644 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 RIPOR3Q96MK2 946 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 TARS2Q9BW92 718 aaKnown RBP20.24■□□□□ 0.83
GPC1-205ENST00000427506 CACNG4Q9UBN1 327 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 MUTYHQ9UIF7 546 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 CLIC4Q9Y696 253 aa20.24■□□□□ 0.83
GPC1-205ENST00000427506 NPHP3-ACAD11A0A0J9YXS1 232 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 LILRB3O75022 631 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 ADH1AP07327 375 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 SP100P23497 879 aaPredicted RBP20.23■□□□□ 0.83
GPC1-205ENST00000427506 CLCN4P51793 760 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 YARSP54577 528 aaKnown RBP20.23■□□□□ 0.83
GPC1-205ENST00000427506 GRIN1Q05586 938 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 USP41Q3LFD5 358 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 ZBTB33Q86T24 672 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 GPBP1Q86WP2 473 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 RNF168Q8IYW5 571 aaPredicted RBP20.23■□□□□ 0.83
GPC1-205ENST00000427506 SPIRE2Q8WWL2 714 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 FBXL18Q96ME1 805 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 NECTIN4Q96NY8 510 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 NTPCRQ9BSD7 190 aaKnown RBP20.23■□□□□ 0.83
GPC1-205ENST00000427506 CCDC94Q9BW85 323 aaPredicted RBP20.23■□□□□ 0.83
GPC1-205ENST00000427506 GPR62Q9BZJ7 368 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 CXCL16Q9H2A7 254 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 TSHZ2Q9NRE2 1034 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 LARSQ9P2J5 1176 aaKnown RBP20.23■□□□□ 0.83
GPC1-205ENST00000427506 CDH22Q9UJ99 828 aa20.23■□□□□ 0.83
GPC1-205ENST00000427506 KRT18P05783 430 aaKnown RBP20.22■□□□□ 0.83
GPC1-205ENST00000427506 WEE2P0C1S8 567 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 PLCG1P19174 1290 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 MTHFRP42898 656 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 OSTNP61366 133 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 DSG1Q02413 1049 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 CEBPZQ03701 1054 aaKnown RBP20.22■□□□□ 0.83
GPC1-205ENST00000427506 RESTQ13127 1097 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 KARSQ15046 597 aaKnown RBP20.22■□□□□ 0.83
GPC1-205ENST00000427506 ATAT1Q5SQI0 421 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 KIAA0319Q5VV43 1072 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 KANK3Q6NY19 840 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 FAM173BQ6P4H8 233 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 TAS1R3Q7RTX0 852 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 HASPINQ8TF76 798 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 B3GALT6Q96L58 329 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 PAAF1Q9BRP4 392 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 CDT1Q9H211 546 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 C11orf16Q9NQ32 467 aa20.22■□□□□ 0.83
GPC1-205ENST00000427506 TOPORSQ9NS56 1045 aaPredicted RBP20.22■□□□□ 0.83
GPC1-205ENST00000427506 SF3B1O75533 1304 aaKnown RBP eCLIP20.22■□□□□ 0.83
GPC1-205ENST00000427506 TEX28O15482 410 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 EFEMP2O95967 443 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 HARSP12081 509 aaKnown RBP20.21■□□□□ 0.83
GPC1-205ENST00000427506 MARCKSP29966 332 aaPredicted RBP20.21■□□□□ 0.83
GPC1-205ENST00000427506 GRM5P41594 1212 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 ARSHQ5FYA8 562 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 HERC4Q5GLZ8 1057 aaPredicted RBP20.21■□□□□ 0.83
GPC1-205ENST00000427506 GLRA4Q5JXX5 417 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 ELMSAN1Q6PJG2 1045 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 TMC5Q6UXY8 1006 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 CEP120Q8N960 986 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 RIN2Q8WYP3 895 aaPredicted RBP20.21■□□□□ 0.83
GPC1-205ENST00000427506 POMKQ9H5K3 350 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 SFXN1Q9H9B4 322 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 CHST7Q9NS84 486 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 ODF2LQ9ULJ1 636 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 NR2E1Q9Y466 385 aa20.21■□□□□ 0.83
GPC1-205ENST00000427506 H0YCG3 227 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 FAM13AO94988 1023 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 KIF4AO95239 1232 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 MCF2P10911 925 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 MATR3P43243 847 aaKnown RBP eCLIP20.2■□□□□ 0.82
GPC1-205ENST00000427506 MCM6Q14566 821 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 SPECC1Q5M775 1068 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 MPZL3Q6UWV2 235 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 CEP57Q86XR8 500 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 TMEM161BQ8NDZ6 487 aa20.2■□□□□ 0.82
GPC1-205ENST00000427506 RAD54LQ92698 747 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms