RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 MATR3P43243 847 aaKnown RBP eCLIP19.74■□□□□ 0.75
HERC3-205ENST00000426683 OR1G1P47890 313 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 DSC1Q08554 894 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 NOLC1Q14978 699 aaKnown RBP eCLIP19.74■□□□□ 0.75
HERC3-205ENST00000426683 TPRNQ4KMQ1 711 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 ZNF720Q7Z2F6 126 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 MAP4K3Q8IVH8 894 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 CCDC65Q8IXS2 484 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 BCL7CQ8WUZ0 217 aaPredicted RBP19.74■□□□□ 0.75
HERC3-205ENST00000426683 IGSF21Q96ID5 467 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 TRIM9Q9C026 710 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 CXCL16Q9H2A7 254 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 THEGQ9P2T0 379 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 MYH11P35749 1972 aa19.74■□□□□ 0.75
HERC3-205ENST00000426683 TRANK1O15050 2925 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 PTGESO14684 152 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 FSCN2O14926 492 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 HNRNPDLO14979 420 aaKnown RBP19.73■□□□□ 0.75
HERC3-205ENST00000426683 CLDN3O15551 220 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 PIGRP01833 764 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 ANP32AP39687 249 aaKnown RBP19.73■□□□□ 0.75
HERC3-205ENST00000426683 YARSP54577 528 aaKnown RBP19.73■□□□□ 0.75
HERC3-205ENST00000426683 MCL1Q07820 350 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 ADGRD2Q7Z7M1 963 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 CEP57L1Q8IYX8 460 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 ACAP3Q96P50 834 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 TCF25Q9BQ70 676 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 ENTPD7Q9NQZ7 604 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 SERTAD1Q9UHV2 236 aa19.73■□□□□ 0.75
HERC3-205ENST00000426683 PRG3Q9Y2Y8 225 aaPredicted RBP19.73■□□□□ 0.75
HERC3-205ENST00000426683 NR1I2O75469 434 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 GCNT3O95395 438 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 THP07101 528 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 ASIC1P78348 528 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 COASYQ13057 564 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 SEZ6Q53EL9 994 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 PLPP4Q5VZY2 271 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 PDE12Q6L8Q7 609 aaKnown RBP19.72■□□□□ 0.75
HERC3-205ENST00000426683 TMC7Q7Z402 723 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 HLA-CQ95604 372 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 PPP2R3CQ969Q6 453 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 HVCN1Q96D96 273 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 C7orf25Q9BPX7 421 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 HAPLN2Q9GZV7 340 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 PLXNA4Q9HCM2 1894 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 OLFML3Q9NRN5 406 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 TOPORSQ9NS56 1045 aaPredicted RBP19.72■□□□□ 0.75
HERC3-205ENST00000426683 COG5Q9UP83 839 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 HPSEQ9Y251 543 aa19.72■□□□□ 0.75
HERC3-205ENST00000426683 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.71■□□□□ 0.75
HERC3-205ENST00000426683 A0A1W2PQ27 194 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 A0A1W2PQ64 194 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 A0A1W2PQD8 194 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 PPP1R37O75864 691 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 AFMP43652 599 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 HYAL1Q12794 435 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 TUSC3Q13454 348 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 GLRA4Q5JXX5 417 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 DDX53Q86TM3 631 aaKnown RBP19.71■□□□□ 0.75
HERC3-205ENST00000426683 STRA6Q9BX79 667 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 BLZF1Q9H2G9 400 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 IGFLR1Q9H665 355 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 NGRNQ9NPE2 291 aaKnown RBP19.71■□□□□ 0.75
HERC3-205ENST00000426683 MARCH5Q9NX47 278 aa19.71■□□□□ 0.75
HERC3-205ENST00000426683 ACTN4O43707 911 aaKnown RBP19.7■□□□□ 0.74
HERC3-205ENST00000426683 SLFN14P0C7P3 912 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 MYBP10242 640 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 CASP1P29466 404 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 GTF2F1P35269 517 aaKnown RBP eCLIP19.7■□□□□ 0.74
HERC3-205ENST00000426683 CASP5P51878 434 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 CNNM4Q6P4Q7 775 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 SLC39A4Q6P5W5 647 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 RBM23Q86U06 439 aaKnown RBP19.7■□□□□ 0.74
HERC3-205ENST00000426683 GRAMD1CQ8IYS0 662 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 VPS52Q8N1B4 723 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 FSIP1Q8NA03 581 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 ATXN2LQ8WWM7 1075 aaKnown RBP19.7■□□□□ 0.74
HERC3-205ENST00000426683 RABGGTAQ92696 567 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 SNX27Q96L92 541 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 COLEC11Q9BWP8 271 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 FGFBP2Q9BYJ0 223 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 UBE2ZQ9H832 354 aaPredicted RBP19.7■□□□□ 0.74
HERC3-205ENST00000426683 CACNG4Q9UBN1 327 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 CIZ1Q9ULV3 898 aaPredicted RBP19.7■□□□□ 0.74
HERC3-205ENST00000426683 PCDHB13Q9Y5F0 798 aa19.7■□□□□ 0.74
HERC3-205ENST00000426683 FAM237AA0A1B0GTK4 181 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 CASTOR2A6NHX0 329 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 ANKRD63C9JTQ0 380 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 F8W810 466 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 NCK2O43639 380 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 CA8P35219 290 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 SYKP43405 635 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 NRIP1P48552 1158 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 NDUFA8P51970 172 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 TFF2Q03403 129 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 KCNA1Q09470 495 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 ALCAMQ13740 583 aa19.69■□□□□ 0.74
HERC3-205ENST00000426683 SMC1AQ14683 1233 aaKnown RBP19.69■□□□□ 0.74
HERC3-205ENST00000426683 BMS1Q14692 1282 aaKnown RBP19.69■□□□□ 0.74
HERC3-205ENST00000426683 NAB2Q15742 525 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms